RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ZNF445P59923 1031 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 KDSRQ06136 332 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 TYRO3Q06418 890 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 RAPGEF1Q13905 1077 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 KLHDC7AQ5VTJ3 777 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 PKN3Q6P5Z2 889 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 TPGS1Q6ZTW0 290 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 CPXM2Q8N436 756 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 NAT16Q8N8M0 369 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 LSM14BQ9BX40 385 aaKnown RBP20.75■□□□□ 0.91
CMTM3-211ENST00000565922 SLC4A5Q9BY07 1137 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 VPS16Q9H269 839 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 PLCB1Q9NQ66 1216 aa20.75■□□□□ 0.91
CMTM3-211ENST00000565922 MYO15AQ9UKN7 3530 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 EML5Q05BV3 1969 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 FOXN3O00409 490 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 KLKB1P03952 638 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 CYBBP04839 570 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 UCHL3P15374 230 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 CDK11BP21127 795 aaKnown RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 PDCLQ13371 301 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 DRAP1Q14919 205 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 TRIP4Q15650 581 aaPredicted RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 GRAMD4Q6IC98 578 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 BEND5Q7L4P6 421 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 TRMT11Q7Z4G4 463 aaKnown RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 TMEM110Q86TL2 294 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 DENND1CQ8IV53 801 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 FAM71AQ8IYT1 594 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 TERB1Q8NA31 727 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 KCNV2Q8TDN2 545 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 USP33Q8TEY7 942 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 FAM149B1Q96BN6 582 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 LHX5Q9H2C1 402 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 EPC1Q9H2F5 836 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 ACP6Q9NPH0 428 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 DNAJC17Q9NVM6 304 aaKnown RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 AGO1Q9UL18 857 aaKnown RBP20.74■□□□□ 0.91
CMTM3-211ENST00000565922 RAB23Q9ULC3 237 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 FHOD1Q9Y613 1164 aa20.74■□□□□ 0.91
CMTM3-211ENST00000565922 SPAG17Q6Q759 2223 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 TBC1D3BA6NDS4 549 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 GABBR2O75899 941 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 NCAM1P13591 858 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 SEC13P55735 322 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 DMC1Q14565 340 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 C2orf27AQ580R0 203 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 NUGGCQ68CJ6 796 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 CAVIN1Q6NZI2 390 aaKnown RBP20.73■□□□□ 0.91
CMTM3-211ENST00000565922 WDR5BQ86VZ2 330 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 UNC45BQ8IWX7 931 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 SCUBE3Q8IX30 993 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 PHTF2Q8N3S3 785 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 CLEC4CQ8WTT0 213 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 SERPINB11Q96P15 392 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 SFMBT1Q9UHJ3 866 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 AJAP1Q9UKB5 411 aaPredicted RBP20.73■□□□□ 0.91
CMTM3-211ENST00000565922 MMP17Q9ULZ9 603 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 VPS13AQ96RL7 3174 aa20.73■□□□□ 0.91
CMTM3-211ENST00000565922 E5RJQ4 531 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 CAPN9O14815 690 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 CLCN1P35523 988 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 FNTBP49356 437 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 COPB1P53618 953 aaKnown RBP20.72■□□□□ 0.91
CMTM3-211ENST00000565922 RING1Q06587 406 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 NNTQ13423 1086 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 HEATR6Q6AI08 1181 aaKnown RBP20.72■□□□□ 0.91
CMTM3-211ENST00000565922 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 SLC47A2Q86VL8 602 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
CMTM3-211ENST00000565922 BPIFA3Q9BQP9 254 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 STK33Q9BYT3 514 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 C2orf42Q9NWW7 574 aa20.72■□□□□ 0.91
CMTM3-211ENST00000565922 LIMA1Q9UHB6 759 aaKnown RBP20.72■□□□□ 0.91
CMTM3-211ENST00000565922 FAM186AA6NE01 2351 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 APBB3O95704 486 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 DGKGP49619 791 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 EOGTQ5NDL2 527 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 FAM217AQ8IXS0 508 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 SUMF1Q8NBK3 374 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 PPP1R13BQ96KQ4 1090 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 HINFPQ9BQA5 517 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 NAA15Q9BXJ9 866 aaKnown RBP20.71■□□□□ 0.91
CMTM3-211ENST00000565922 IRX2Q9BZI1 471 aaPredicted RBP20.71■□□□□ 0.91
CMTM3-211ENST00000565922 POPDC2Q9HBU9 364 aa20.71■□□□□ 0.91
CMTM3-211ENST00000565922 SMG5Q9UPR3 1016 aaKnown RBP20.71■□□□□ 0.91
CMTM3-211ENST00000565922 RALGAPA1Q6GYQ0 2036 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 USP34Q70CQ2 3546 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 SMTNL1A8MU46 457 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 F8VZ95 297 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 PAPSS1O43252 624 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-211ENST00000565922 MSI1O43347 362 aaKnown RBP20.7■□□□□ 0.9
CMTM3-211ENST00000565922 PENKP01210 267 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-211ENST00000565922 GLI1P08151 1106 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 DGKEP52429 567 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 TBX4P57082 545 aa20.7■□□□□ 0.9
CMTM3-211ENST00000565922 YWHAZP63104 245 aaKnown RBP20.7■□□□□ 0.9
CMTM3-211ENST00000565922 E2F5Q15329 346 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms