RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 OTOAQ7RTW8 1153 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ATG9AQ7Z3C6 839 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CEP57Q86XR8 500 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 STX12Q86Y82 276 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CPOQ8IVL8 374 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 AKR7LQ8NHP1 331 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 FBXO32Q969P5 355 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ZDHHC15Q96MV8 337 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ABHD1Q96SE0 405 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 KCNJ15Q99712 375 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SH3GL3Q99963 347 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 ERP44Q9BS26 406 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 TRIM62Q9BVG3 475 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CD244Q9BZW8 370 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHD9-216ENST00000565803 TTYH1Q9H313 450 aaPredicted RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 XKR8Q9H6D3 395 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 PSTPIP2Q9H939 334 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SLAMF7Q9NQ25 335 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 MRPL40Q9NQ50 206 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 QPCTLQ9NXS2 382 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 SUCLA2Q9P2R7 463 aaPredicted RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 GULP1Q9UBP9 304 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 RCOR1Q9UKL0 485 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 GRID1Q9ULK0 1009 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 L1RE1Q9UN81 338 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 PPIEQ9UNP9 301 aaKnown RBP3.21□□□□□ -1.9
CHD9-216ENST00000565803 ADAMTS8Q9UP79 889 aa3.21□□□□□ -1.9
CHD9-216ENST00000565803 CCDC151A5D8V7 595 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 CCDC154A6NI56 674 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 FIGNL2A6NMB9 653 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PRR33A8MZF0 331 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 CYTIPO60759 359 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 HSF2BPO75031 334 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 SRGAP2BP0DMP2 458 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 TMIGD3P0DMS9 266 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 VAV1P15498 845 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ATP2A2P16615 1042 aaKnown RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 C5AR1P21730 350 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PSMA5P28066 241 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 IL15P40933 162 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 GPC3P51654 580 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 STAT5BP51692 787 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 SREBF2Q12772 1141 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 TRIP4Q15650 581 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 KYNUQ16719 465 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 IFI44LQ53G44 452 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 LDLRAP1Q5SW96 308 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ZNF697Q5TEC3 545 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 OTUD7BQ6GQQ9 843 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ABHD17CQ6PCB6 329 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 TMEM102Q8N9M5 508 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 TRIM58Q8NG06 486 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 KLHDC4Q8TBB5 520 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PIP4K2CQ8TBX8 421 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 NCSTNQ92542 709 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 DPF2Q92785 391 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ZKSCAN4Q969J2 545 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 OSBP2Q969R2 916 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 FAM120BQ96EK7 910 aaKnown RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 HS6ST2Q96MM7 605 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 SPATA13Q96N96 652 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 FAM111AQ96PZ2 611 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 TREX2Q9BQ50 279 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 PHF20Q9BVI0 1012 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 BBS2Q9BXC9 721 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 NDEL1Q9GZM8 345 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 NT5C3AQ9H0P0 336 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 SH2D4AQ9H788 454 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 MMRN2Q9H8L6 949 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 CYP26B1Q9NR63 512 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 ZBTB40Q9NUA8 1239 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 SPATS2LQ9NUQ6 558 aaKnown RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 PKD2L2Q9NZM6 624 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 AFF4Q9UHB7 1163 aaKnown RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 PSME2Q9UL46 239 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 AKT3Q9Y243 479 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 CBY1Q9Y3M2 126 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 USP15Q9Y4E8 981 aaPredicted RBP3.2□□□□□ -1.9
CHD9-216ENST00000565803 PCDHGC5Q9Y5F6 944 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PCNTO95613 3336 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ATRNL1Q5VV63 1379 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 GOLGA8IPA6NC78 632 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 GOLGA8MH3BSY2 632 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PSMD9O00233 223 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 EML1O00423 815 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PPEF2O14830 753 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 FGF18O76093 207 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 OPN1MWP04001 364 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ADH1AP07327 375 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 OPN1MW2P0DN77 364 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 OPN1MW3P0DN78 364 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 ACPPP15309 386 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PDGFRAP16234 1089 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 NOS3P29474 1203 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PRKAR1BP31321 381 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 CDK8P49336 464 aa3.2□□□□□ -1.9
CHD9-216ENST00000565803 PLCD1P51178 756 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms