RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PENKP01210 267 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 PROS1P07225 676 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 C1QTNF9P0C862 333 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 KRT13P13646 458 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 SPINK2P20155 84 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RPL13P26373 211 aaKnown RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 MAPK8P45983 427 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 DGKGP49619 791 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RAD23BP54727 409 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 KRT85P78386 507 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF33AQ06730 810 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF252P-AS1Q0IIN9 211 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 SEMA3BQ13214 749 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ENPP2Q13822 863 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 GEN1Q17RS7 908 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RAB41Q5JT25 222 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 KRT39Q6A163 491 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 SLC36A4Q6YBV0 504 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 BHLHA9Q7RTU4 235 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 CHPFQ8IZ52 775 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RBBP8NLQ8NC74 664 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 DEFB124Q8NES8 71 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 TATDN2Q93075 761 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 BHMTQ93088 406 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ERLEC1Q96DZ1 483 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 EEF2KMTQ96G04 330 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 TMEM176AQ96HP8 235 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF419Q96HQ0 510 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 HEXIM2Q96MH2 286 aaKnown RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ARID3AQ99856 593 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 TMEM121BQ9BXQ6 578 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 UBXN6Q9BZV1 441 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 MMRN2Q9H8L6 949 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RAB20Q9NX57 234 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 CACNA2D2Q9NY47 1150 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 LSM7Q9UK45 103 aaKnown RBP9.02□□□□□ -0.97
CAPN3-213ENST00000565173 CLEC4EQ9ULY5 219 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 SLC6A14Q9UN76 642 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 SLC27A6Q9Y2P4 619 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 RAD54BQ9Y620 910 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ASCC3Q8N3C0 2202 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 PCDH15Q96QU1 1955 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 PI4KAP42356 2102 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 GFRA2O00451 464 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF217O75362 1048 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 SERPINF2P08697 491 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 RALAP11233 206 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 DPP6P42658 865 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 MFAP3P55082 362 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 COG7P83436 770 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 EFEMP1Q12805 493 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 FOXC1Q12948 553 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 DUOXA1Q1HG43 343 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 EDRF1Q3B7T1 1238 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CBWD6Q4V339 395 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CBWD3Q5JTY5 395 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CBWD5Q5RIA9 395 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 ARHGAP17Q68EM7 881 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 PM20D1Q6GTS8 502 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 SDE2Q6IQ49 451 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 TADA2BQ86TJ2 420 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 PIGZQ86VD9 579 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 SMYD4Q8IYR2 804 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 TRIML1Q8N9V2 468 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 ANKRD52Q8NB46 1076 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 FBXL13Q8NEE6 735 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CEP76Q8TAP6 659 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 PIWIL1Q96J94 861 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 MKRN2Q9H000 416 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 AGO1Q9UL18 857 aaKnown RBP9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CYP8B1Q9UNU6 501 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF510Q9Y2H8 683 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 COQ4Q9Y3A0 265 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 STON1Q9Y6Q2 735 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CEP192Q8TEP8 1941 aa9.01□□□□□ -0.97
CAPN3-213ENST00000565173 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 ADAMTS9Q9P2N4 1935 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 PCNX2A6NKB5 2137 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 KCNJ18B7U540 433 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 TULP2O00295 520 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 GJB3O75712 270 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 CFIP05156 583 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 HMBSP08397 361 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 CD59P13987 128 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 TRIM21P19474 475 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 CORO1AP31146 461 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 CHKAP35790 457 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 IL12RB1P42701 662 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 PRCPP42785 496 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 MXI1P50539 228 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 FAM193AP78312 1265 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 GFPT1Q06210 699 aaPredicted RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 FUT11Q495W5 492 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 TMEM215Q68D42 235 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms