RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 LRG1P02750 347 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 C8AP07357 584 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CSH1P0DML2 217 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CSH2P0DML3 217 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 NOS2P35228 1153 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 MATKP42679 507 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 PTPN9P43378 593 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 SULT1E1P49888 294 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CLCN4P51793 760 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 EPHB3P54753 998 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 ATP11AP98196 1134 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 TAF10Q12962 218 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 ACAP1Q15027 740 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CDO1Q16878 200 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 C15orf59Q2T9L4 293 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 DCAF6Q58WW2 860 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 DAB2IPQ5VWQ8 1189 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 BSPRYQ5W0U4 402 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 ANKRD54Q6NXT1 300 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 SCD5Q86SK9 330 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 MON1AQ86VX9 555 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 EDEM1Q92611 657 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 SLITRK1Q96PX8 696 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 TTLL2Q9BWV7 592 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 POMKQ9H5K3 350 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 STAP1Q9ULZ2 295 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 SNX12Q9UMY4 172 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 NAALADL1Q9UQQ1 740 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
SF3B3-205ENST00000564899 CFAP47Q6ZTR5 3102 aa11.57□□□□□ -0.56
SF3B3-205ENST00000564899 GPR179Q6PRD1 2367 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PATJQ8NI35 1801 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 MED19A0JLT2 244 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-205ENST00000564899 CCDC66A2RUB6 948 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PSTPIP1O43586 416 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 LRCH4O75427 683 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 URI1O94763 535 aaPredicted RBP11.56□□□□□ -0.56
SF3B3-205ENST00000564899 C1RP00736 705 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 FYNP06241 537 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 NCAM1P13591 858 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 CTNNA2P26232 953 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 CTNNA1P35221 906 aaKnown RBP11.56□□□□□ -0.56
SF3B3-205ENST00000564899 GJC1P36383 396 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 TAS2R40P59535 323 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 FOXK2Q01167 660 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 SLC25A52Q3SY17 297 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 SYPL2Q5VXT5 272 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PAPD7Q5XG87 772 aaKnown RBP11.56□□□□□ -0.56
SF3B3-205ENST00000564899 BEND5Q7L4P6 421 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 ITIH5Q86UX2 942 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 RHOT1Q8IXI2 618 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PDZD8Q8NEN9 1154 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 FAM172AQ8WUF8 416 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 KRT35Q92764 455 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 CD101Q93033 1021 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PSMG2Q969U7 264 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 HES6Q96HZ4 224 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 TBCBQ99426 244 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 PSMB7Q99436 277 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 NCAPGQ9BPX3 1015 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 NMUR1Q9HB89 426 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 TLR8Q9NR97 1041 aaKnown RBP11.56□□□□□ -0.56
SF3B3-205ENST00000564899 ABCC13Q9NSE7 274 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 RRN3Q9NYV6 651 aa11.56□□□□□ -0.56
SF3B3-205ENST00000564899 KCNK3O14649 394 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 DDX3YO15523 660 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 PI15O43692 258 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 EPCAMP16422 314 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 HMGA1P17096 107 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 TCP1P17987 556 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 MIPP30301 263 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 RDXP35241 583 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 PCK1P35558 622 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 MARCKSL1P49006 195 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 PSEN1P49768 467 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 AMPD2Q01433 879 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 HADHQ16836 314 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 PPM1LQ5SGD2 360 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 OTUD1Q5VV17 481 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 CWF19L1Q69YN2 538 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 STRADAQ7RTN6 431 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 ELMOD1Q8N336 334 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 ARFGAP1Q8N6T3 406 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 DQX1Q8TE96 717 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 RNF139Q8WU17 664 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 OVCA2Q8WZ82 227 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 CENPIQ92674 756 aaPredicted RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 TRMT2BQ96GJ1 504 aaKnown RBP11.55□□□□□ -0.56
SF3B3-205ENST00000564899 MYRFLQ96LU7 910 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 NPY6RQ99463 290 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 PLEKHA4Q9H4M7 779 aa11.55□□□□□ -0.56
SF3B3-205ENST00000564899 FAM204AQ9H8W3 233 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms