RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 UNC45BQ8IWX7 931 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 PHTF2Q8N3S3 785 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 NAT8LQ8N9F0 302 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 ACTL9Q8TC94 416 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 TIMMDC1Q9NPL8 285 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 POLIQ9UNA4 740 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 CCNE2O96020 404 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 CD48P09326 243 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 OXCT1P55809 520 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 MRPS22P82650 360 aaKnown RBP16.83■□□□□ 0.29
LINC00554-201ENST00000564841 GSTM4Q03013 218 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 KRT39Q6A163 491 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 SV2AQ7L0J3 742 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 GPC2Q8N158 579 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 DCUN1D5Q9BTE7 237 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 COPS7BQ9H9Q2 264 aaPredicted RBP16.83■□□□□ 0.29
LINC00554-201ENST00000564841 FAIMQ9NVQ4 179 aa16.83■□□□□ 0.29
LINC00554-201ENST00000564841 GNEQ9Y223 722 aaKnown RBP16.83■□□□□ 0.29
LINC00554-201ENST00000564841 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.29
LINC00554-201ENST00000564841 CCNT2O60583 730 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 NCF2P19878 526 aaPredicted RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 ITGAXP20702 1163 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 COPAP53621 1224 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 WNT7BP56706 349 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 OTUD4Q01804 1114 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 CD300CQ08708 224 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 PGM2L1Q6PCE3 622 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 FAM71DQ8N9W8 422 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 DNAJC16Q9Y2G8 782 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 PLLPQ9Y342 182 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 A0A0B4J269 797 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 BTBD19C9JJ37 291 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 THRAP10827 490 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 QARSP47897 775 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 OGDHQ02218 1023 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF252P-AS1Q0IIN9 211 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 TUBB3Q13509 450 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 OGFRL1Q5TC84 451 aaPredicted RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 ANO5Q75V66 913 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 PPIL6Q8IXY8 311 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 TFB1MQ8WVM0 346 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 SLC44A1Q8WWI5 657 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 DCPSQ96C86 337 aaKnown RBP16.83■□□□□ 0.28
LINC00554-201ENST00000564841 C7orf26Q96N11 449 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 SPON1Q9HCB6 807 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 MAN1C1Q9NR34 630 aa16.83■□□□□ 0.28
LINC00554-201ENST00000564841 SIN3BO75182 1162 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
LINC00554-201ENST00000564841 ACOT2P49753 483 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 PSMD6Q15008 389 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF362Q5T0B9 420 aaPredicted RBP16.82■□□□□ 0.28
LINC00554-201ENST00000564841 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 ELMSAN1Q6PJG2 1045 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 HSPH1Q92598 858 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 RIT2Q99578 217 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 C1orf21Q9H246 121 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 PCDH9Q9HC56 1237 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 AVENQ9NQS1 362 aaPredicted RBP16.82■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF214Q9UL59 606 aaPredicted RBP16.82■□□□□ 0.28
LINC00554-201ENST00000564841 E2F8A0AVK6 867 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 PIK3R2O00459 728 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 HOXD12P35452 270 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 MTTPP55157 894 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 HDAC4P56524 1084 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 SUPT20HL1Q3ZLR7 823 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 MROH9Q5TGP6 573 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 KBTBD6Q86V97 674 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 PQLC1Q8N2U9 271 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 FBXL13Q8NEE6 735 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 RAB3IL1Q8TBN0 382 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 PNPOQ9NVS9 261 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 UBIAD1Q9Y5Z9 338 aa16.82■□□□□ 0.28
LINC00554-201ENST00000564841 E9PBE3 544 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 P4HA2O15460 535 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 ADCY6O43306 1168 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 PHEXP78562 749 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 PTP4A2Q12974 167 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 NRF1Q16656 503 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 ZNF394Q53GI3 561 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 FAXCQ5TGI0 409 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 SWSAP1Q6NVH7 229 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 MAVSQ7Z434 540 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 PATL1Q86TB9 770 aaKnown RBP16.81■□□□□ 0.28
LINC00554-201ENST00000564841 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 BTBD9Q96Q07 612 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 MRPS26Q9BYN8 205 aaKnown RBP16.81■□□□□ 0.28
LINC00554-201ENST00000564841 SELENONQ9NZV5 590 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 GABBR1Q9UBS5 961 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 hCG_1818297A0A087WSY0 165 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 SLC26A4O43511 780 aa16.81■□□□□ 0.28
LINC00554-201ENST00000564841 DENRO43583 198 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms