RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 HOXB2P14652 356 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 BCKDHBP21953 392 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 BCAT1P54687 386 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 YWHAGP61981 247 aaKnown RBP eCLIP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CBWD6Q4V339 395 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 DCAF17Q5H9S7 520 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 SCML4Q8N228 414 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CPXM2Q8N436 756 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 KCTD13Q8WZ19 329 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 SLC35C1Q96A29 364 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 EDEM2Q9BV94 578 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 SLC2A11Q9BYW1 496 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 MARCH2Q9P0N8 246 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 GON4LQ3T8J9 2241 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 NUP205Q92621 2012 aa12.78□□□□□ -0.36
GTF3C1-204ENST00000564664 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 KLKB1P03952 638 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 PAEPP09466 180 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 GABRG2P18507 467 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 TKTL1P51854 596 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 ZNF445P59923 1031 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 BST2Q10589 180 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 EFEMP1Q12805 493 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 STILQ15468 1287 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 METTL3Q86U44 580 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 PIGKQ92643 395 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 PLD4Q96BZ4 506 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 ARID3AQ99856 593 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 NUSAP1Q9BXS6 441 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 SMOC1Q9H4F8 434 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 LRRC4Q9HBW1 653 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 RASAL2Q9UJF2 1139 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 NUDT5Q9UKK9 219 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 AGO1Q9UL18 857 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 HCN2Q9UL51 889 aa12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 HBS1LQ9Y450 684 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-204ENST00000564664 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 BICDL2A1A5D9 508 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 MDM4O15151 490 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIM24O15164 1050 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 KCNK5O95279 499 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 LATS1O95835 1130 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 GNA14O95837 355 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 CORO1AP31146 461 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 FMO5P49326 533 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 IRX4P78413 519 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 SHC2P98077 582 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 EIF4HQ15056 248 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TRIP4Q15650 581 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 DUOXA1Q1HG43 343 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 N4BP2L1Q5TBK1 243 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 FYB2Q5VWT5 728 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 LYSMD4Q5XG99 296 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 LCLAT1Q6UWP7 414 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TMEFF1Q8IYR6 380 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 NT5C1BQ96P26 610 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 IPO9Q96P70 1041 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 ABCC13Q9NSE7 274 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 THAP10Q9P2Z0 257 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 PILRBQ9UKJ0 227 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 ANGPTL2Q9UKU9 493 aa12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
GTF3C1-204ENST00000564664 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CEACAM1P13688 526 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CD19P15391 556 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 CSRP1P21291 193 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 PMLP29590 882 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 PDE4CQ08493 712 aa12.75□□□□□ -0.37
GTF3C1-204ENST00000564664 ENPP2Q13822 863 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms