RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ORC4O43929 436 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 TMPRSS11DO60235 418 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 ZNF202O95125 648 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 ADH4P08319 380 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 EBLN1P0CF75 366 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 ADRA1DP25100 572 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 PCSK6P29122 969 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 SEC24CP53992 1094 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 DEUP1Q05D60 604 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 ZNF569Q5MCW4 686 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 L1TD1Q5T7N2 865 aaKnown RBP5.35□□□□□ -1.55
LINC00560-201ENST00000564593 TTC22Q5TAA0 569 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 IGFL4Q6B9Z1 124 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 ABHD11Q8NFV4 315 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 CSGALNACT1Q8TDX6 532 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 THAP4Q8WY91 577 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 CPT1BQ92523 772 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 PAAF1Q9BRP4 392 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 CCDC134Q9H6E4 229 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 FBXO28Q9NVF7 368 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 FEM1BQ9UK73 627 aa5.35□□□□□ -1.55
LINC00560-201ENST00000564593 LRRFIP2Q9Y608 721 aaKnown RBP5.35□□□□□ -1.55
LINC00560-201ENST00000564593 SALL3Q9BXA9 1300 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 LINC00473A8K010 186 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 SH3BP5O60239 455 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 LARGE1O95461 756 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 PYGLP06737 847 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 FAM163BP0C2L3 166 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 ALADP13716 330 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 ZNF37AP17032 561 aaPredicted RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 ADRA1BP35368 520 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 PAPOLAP51003 745 aaKnown RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 SF3A3Q12874 501 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 FOXI1Q12951 378 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 DENND2CQ68D51 928 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 ANKRD16Q6P6B7 361 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 MTHFD1LQ6UB35 978 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 MMS22LQ6ZRQ5 1243 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 BEND2Q8NDZ0 799 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 GOLGA1Q92805 767 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 SDCCAG3Q96C92 435 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 LENG8Q96PV6 779 aaPredicted RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 PYM1Q9BRP8 204 aaKnown RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 MECRQ9BV79 373 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 SNX15Q9NRS6 342 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 LIN7CQ9NUP9 197 aaKnown RBP5.34□□□□□ -1.55
LINC00560-201ENST00000564593 NDUFAF4Q9P032 175 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 ST3GAL5Q9UNP4 418 aa5.34□□□□□ -1.55
LINC00560-201ENST00000564593 RRN3P2A6NIE6 340 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 E7EVH7 732 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 H0YIZ8 118 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 NCAM2O15394 837 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 KRT38O76015 456 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 TJP3O95049 919 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 FSHBP01225 129 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 NPSP0C0P6 89 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 MYCLP12524 364 aaPredicted RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 MMP8P22894 467 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 SERPINA4P29622 427 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 MCM7P33993 719 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 DIO1P49895 249 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 EEFSECP57772 596 aaKnown RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 TXNL4AP83876 142 aaKnown RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 GALNTL6Q49A17 601 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 CCDC70Q6NSX1 233 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 RINLQ6ZS11 566 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 HERC6Q8IVU3 1022 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 PNPLA1Q8N8W4 532 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 USP13Q92995 863 aaPredicted RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 PRR11Q96HE9 360 aaPredicted RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 TBATAQ96M53 351 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 SAP30LQ9HAJ7 183 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 RXFP3Q9NSD7 469 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 ADAMTS5Q9UNA0 930 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 UBE2J1Q9Y385 318 aaPredicted RBP5.33□□□□□ -1.56
LINC00560-201ENST00000564593 PCDHB2Q9Y5E7 798 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 GXYLT2A0PJZ3 443 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 GRID2IPA4D2P6 1211 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 M0QZQ0 153 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 ELFN1P0C7U0 828 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 CKMT1AP12532 417 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 RXRAP19793 462 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 THBS4P35443 961 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 CDK7P50613 346 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 CCT8P50990 548 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 ACTR2P61160 394 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 PSG6Q00889 435 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 DNASE1L3Q13609 305 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 PCID2Q5JVF3 399 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 ANKRD40Q6AI12 368 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 LVRNQ6Q4G3 990 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 FAM71DQ8N9W8 422 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 FSD1LQ9BXM9 530 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 RIC8AQ9NPQ8 531 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 KCND3Q9UK17 655 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 VPS4AQ9UN37 437 aa5.33□□□□□ -1.56
LINC00560-201ENST00000564593 ZBTB1Q9Y2K1 713 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms