RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 ECI2O75521 394 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 NDUFA10O95299 355 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 TCF3P15923 654 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 NOS2P35228 1153 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 ZNF77Q15935 545 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 MTSS1LQ765P7 747 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 BNIPLQ7Z465 357 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 TADA2BQ86TJ2 420 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 TAC4Q86UU9 113 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 ZNF653Q96CK0 615 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 NPY6RQ99463 290 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 TRIM62Q9BVG3 475 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 STC2O76061 302 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 TRUB2O95900 331 aaKnown RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 IGLV3-27P01718 113 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 KLKB1P03952 638 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 CYP1A2P05177 515 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 MYBL1P10243 752 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 OGDHQ02218 1023 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 FCHO2Q0JRZ9 810 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 SLC44A3Q8N4M1 653 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 RXFP2Q8WXD0 754 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 CFAP57Q96MR6 1250 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 MCEEQ96PE7 176 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 EIF3CQ99613 913 aaKnown RBP13.01□□□□□ -0.33
KARS-204ENST00000564578 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 OBP2AQ9NY56 170 aa13.01□□□□□ -0.33
KARS-204ENST00000564578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.33
KARS-204ENST00000564578 SLC12A8A0AV02 714 aa13□□□□□ -0.33
KARS-204ENST00000564578 TMEM191CA6NGB0 347 aa13□□□□□ -0.33
KARS-204ENST00000564578 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
KARS-204ENST00000564578 H2AFZP0C0S5 128 aa13□□□□□ -0.33
KARS-204ENST00000564578 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 PDGFRAP16234 1089 aa13□□□□□ -0.33
KARS-204ENST00000564578 GPC5P78333 572 aa13□□□□□ -0.33
KARS-204ENST00000564578 COG7P83436 770 aa13□□□□□ -0.33
KARS-204ENST00000564578 USP4Q13107 963 aa13□□□□□ -0.33
KARS-204ENST00000564578 TRIP4Q15650 581 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
KARS-204ENST00000564578 CCDC14Q49A88 953 aa13□□□□□ -0.33
KARS-204ENST00000564578 RAB6CQ53S08 254 aa13□□□□□ -0.33
KARS-204ENST00000564578 SH3PXD2AQ5TCZ1 1133 aa13□□□□□ -0.33
KARS-204ENST00000564578 H2AFVQ71UI9 128 aa13□□□□□ -0.33
KARS-204ENST00000564578 BPIFB1Q8TDL5 484 aa13□□□□□ -0.33
KARS-204ENST00000564578 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
KARS-204ENST00000564578 NXPE3Q969Y0 559 aa13□□□□□ -0.33
KARS-204ENST00000564578 TRIM11Q96F44 468 aa13□□□□□ -0.33
KARS-204ENST00000564578 ASIC4Q96FT7 647 aa13□□□□□ -0.33
KARS-204ENST00000564578 SLC39A13Q96H72 371 aa13□□□□□ -0.33
KARS-204ENST00000564578 RAB6CQ9H0N0 254 aa13□□□□□ -0.33
KARS-204ENST00000564578 KIF9Q9HAQ2 790 aa13□□□□□ -0.33
KARS-204ENST00000564578 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
KARS-204ENST00000564578 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
KARS-204ENST00000564578 MYO1AQ9UBC5 1043 aa13□□□□□ -0.33
KARS-204ENST00000564578 TFR2Q9UP52 801 aa13□□□□□ -0.33
KARS-204ENST00000564578 IRAK2O43187 625 aa13□□□□□ -0.33
KARS-204ENST00000564578 PSMC3P17980 439 aa13□□□□□ -0.33
KARS-204ENST00000564578 CYLC1P35663 651 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 CCZ1BP86790 482 aa13□□□□□ -0.33
KARS-204ENST00000564578 CCZ1P86791 482 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
KARS-204ENST00000564578 GRM2Q14416 872 aa13□□□□□ -0.33
KARS-204ENST00000564578 C15orf59Q2T9L4 293 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 GJD3Q8N144 294 aa13□□□□□ -0.33
KARS-204ENST00000564578 TTC16Q8NEE8 873 aa13□□□□□ -0.33
KARS-204ENST00000564578 E2F7Q96AV8 911 aa13□□□□□ -0.33
KARS-204ENST00000564578 PGAP3Q96FM1 320 aaPredicted RBP13□□□□□ -0.33
KARS-204ENST00000564578 TBCBQ99426 244 aa13□□□□□ -0.33
KARS-204ENST00000564578 LINC00597Q9H2U6 94 aa13□□□□□ -0.33
KARS-204ENST00000564578 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 M0QYT0 321 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 ARNTLO00327 626 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 DPYSL4O14531 572 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 ENDOD1O94919 500 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 HMBSP08397 361 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 TMEM253P0C7T8 217 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 IRF1P10914 325 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 ATXN1P54253 815 aaKnown RBP12.99□□□□□ -0.33
KARS-204ENST00000564578 NNTQ13423 1086 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 Q6ZNB5 142 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 HTR3DQ70Z44 454 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
KARS-204ENST00000564578 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 FCRL2Q96LA5 508 aaPredicted RBP12.99□□□□□ -0.33
KARS-204ENST00000564578 SERPINB11Q96P15 392 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 PIGVQ9NUD9 493 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 DDIT4Q9NX09 232 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms