RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 INVSQ9Y283 1065 aa15.74■□□□□ 0.11
SPG7-210ENST00000564409 SLC27A6Q9Y2P4 619 aa15.74■□□□□ 0.11
SPG7-210ENST00000564409 BICDL2A1A5D9 508 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 ANTXRLA6NF34 631 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 MDM4O15151 490 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 PENKP01210 267 aaPredicted RBP15.73■□□□□ 0.11
SPG7-210ENST00000564409 CYBBP04839 570 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 PAEPP09466 180 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 CISD3P0C7P0 127 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 SETSIPP0DME0 302 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 BCKDHBP21953 392 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 FMO5P49326 533 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 DHPSP49366 369 aaPredicted RBP15.73■□□□□ 0.11
SPG7-210ENST00000564409 TKTL1P51854 596 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 PMS1P54277 932 aaKnown RBP15.73■□□□□ 0.11
SPG7-210ENST00000564409 ZNF445P59923 1031 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 YWHAGP61981 247 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPG7-210ENST00000564409 STILQ15468 1287 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 MAP7D1Q3KQU3 841 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 CHPFQ8IZ52 775 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 CPXM2Q8N436 756 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 GABRG3Q99928 467 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 EDEM2Q9BV94 578 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 SLC2A11Q9BYW1 496 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 LRRC4Q9HBW1 653 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 NUDT5Q9UKK9 219 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 TSPAN16Q9UKR8 245 aa15.73■□□□□ 0.11
SPG7-210ENST00000564409 AP5Z1O43299 807 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 KLKB1P03952 638 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 CD19P15391 556 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 CORO1AP31146 461 aaKnown RBP15.72■□□□□ 0.11
SPG7-210ENST00000564409 EFEMP1Q12805 493 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 LMAN2Q12907 356 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 GOLGA7BQ2TAP0 167 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 RABEPKQ7Z6M1 372 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 SYT12Q8IV01 421 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 UBR7Q8N806 425 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 UCMAQ8WVF2 138 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 KCTD13Q8WZ19 329 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 NT5C1BQ96P26 610 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
SPG7-210ENST00000564409 RXFP3Q9NSD7 469 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 RASAL2Q9UJF2 1139 aa15.72■□□□□ 0.11
SPG7-210ENST00000564409 A0A1W2PQF6 199 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 LNP1A1A4G5 178 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 TRIM49BA6NDI0 452 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 TIMM44O43615 452 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 GNA14O95837 355 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 GABRG2P18507 467 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 PDE4CQ08493 712 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 EGFLAMQ63HQ2 1017 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 LCLAT1Q6UWP7 414 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 FAM217AQ8IXS0 508 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
SPG7-210ENST00000564409 RLN3Q8WXF3 142 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 PIGKQ92643 395 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 IRX2Q9BZI1 471 aaPredicted RBP15.71■□□□□ 0.11
SPG7-210ENST00000564409 SMOC1Q9H4F8 434 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 CNGB3Q9NQW8 809 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 ABCC13Q9NSE7 274 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 MAN1B1Q9UKM7 699 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 AGO1Q9UL18 857 aaKnown RBP15.71■□□□□ 0.11
SPG7-210ENST00000564409 HCN2Q9UL51 889 aa15.71■□□□□ 0.11
SPG7-210ENST00000564409 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
SPG7-210ENST00000564409 HBS1LQ9Y450 684 aaKnown RBP15.71■□□□□ 0.11
SPG7-210ENST00000564409 SLC12A8A0AV02 714 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 PRRT4C9JH25 899 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 O00370 1275 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 TRIM24O15164 1050 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 LATS1O95835 1130 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 EIF4HQ15056 248 aaKnown RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 TRIP4Q15650 581 aaPredicted RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 CNGA2Q16280 664 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 FYB2Q5VWT5 728 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 PEAR1Q5VY43 1037 aaPredicted RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 LYSMD4Q5XG99 296 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 TCEAL6Q6IPX3 200 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 TTI2Q6NXR4 508 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 TOGARAM2Q6ZUX3 1019 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 METTL3Q86U44 580 aaKnown RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 DENND1CQ8IV53 801 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 SIX6OS1Q8N1H7 587 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 CEP76Q8TAP6 659 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 RNF139Q8WU17 664 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 IRGQQ8WZA9 623 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 ERCC4Q92889 916 aaPredicted RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 TCEAL3Q969E4 200 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 NUSAP1Q9BXS6 441 aaKnown RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 ULBP1Q9BZM6 244 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 CD248Q9HCU0 757 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 ZDHHC4Q9NPG8 344 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 CALCOCO1Q9P1Z2 691 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 MBD1Q9UIS9 605 aaPredicted RBP15.7■□□□□ 0.1
SPG7-210ENST00000564409 ACACBO00763 2458 aa15.7■□□□□ 0.1
SPG7-210ENST00000564409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms