RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PGAP3Q96FM1 320 aaPredicted RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 PCDHB18PQ96TA0 734 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 DDX23Q9BUQ8 820 aaKnown RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 ABHD10Q9NUJ1 306 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 SEPT11Q9NVA2 429 aaKnown RBP17.42■□□□□ 0.38
RNF40-206ENST00000564260 STOML2Q9UJZ1 356 aa17.42■□□□□ 0.38
RNF40-206ENST00000564260 TMEM221A6NGB7 291 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 AKR1B15C9JRZ8 316 aaPredicted RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 M0R296 226 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 PIK3R2O00459 728 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 GREM1O60565 184 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 STC2O76061 302 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 ADH1CP00326 375 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 F9P00740 461 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 CDC25BP30305 580 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 PTP4A2Q12974 167 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 PREPLQ4J6C6 727 aaPredicted RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 FAM102AQ5T9C2 384 aaPredicted RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 E4F1Q66K89 784 aaPredicted RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 ZNF852Q6ZMS4 543 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 SUGP1Q8IWZ8 645 aaKnown RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 SLC30A5Q8TAD4 765 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 RIN3Q8TB24 985 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 DQX1Q8TE96 717 aaKnown RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 CPLX3Q8WVH0 158 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 NDRG1Q92597 394 aaKnown RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 EDEM1Q92611 657 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF40-206ENST00000564260 NT5C3BQ969T7 300 aa17.41■□□□□ 0.38
RNF40-206ENST00000564260 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF40-206ENST00000564260 HELZP42694 1942 aaKnown RBP17.41■□□□□ 0.38
RNF40-206ENST00000564260 SLC12A8A0AV02 714 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 PRR33A8MZF0 331 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 RTN2O75298 545 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 DESP17661 470 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 MAGEA9P43362 315 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 EIF4EBP2Q13542 120 aaPredicted RBP17.4■□□□□ 0.38
RNF40-206ENST00000564260 DCAF6Q58WW2 860 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
RNF40-206ENST00000564260 FAM217AQ8IXS0 508 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 CPXM2Q8N436 756 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 CCDC26Q8TAB7 109 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 OLIG1Q8TAK6 271 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 DDX50Q9BQ39 737 aaKnown RBP17.4■□□□□ 0.38
RNF40-206ENST00000564260 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 ECT2Q9H8V3 914 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 HPS4Q9NQG7 708 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
RNF40-206ENST00000564260 MARK1Q9P0L2 795 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 IMPACTQ9P2X3 320 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 TJP2Q9UDY2 1190 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 TMEM59LQ9UK28 342 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 PIAS3Q9Y6X2 628 aa17.4■□□□□ 0.38
RNF40-206ENST00000564260 ANKRD62A6NC57 917 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.37
RNF40-206ENST00000564260 IRAK2O43187 625 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 AP5Z1O43299 807 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 TRUB2O95900 331 aaKnown RBP17.39■□□□□ 0.37
RNF40-206ENST00000564260 SLC11A2P49281 568 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 CLCN5P51795 746 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 NUBP1P53384 320 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 TBX4P57082 545 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 SLC25A52Q3SY17 297 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 TMC6Q7Z403 805 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 MCOLN2Q8IZK6 566 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 DEFB106AQ8N104 65 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 SIX5Q8N196 739 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 SLC39A13Q96H72 371 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 C11orf70Q9BRQ4 267 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 IER2Q9BTL4 223 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 SLC12A6Q9UHW9 1150 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 NUDT5Q9UKK9 219 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 NAALADL1Q9UQQ1 740 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 SCINQ9Y6U3 715 aa17.39■□□□□ 0.37
RNF40-206ENST00000564260 KANSL1LA0AUZ9 987 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 MDM4O15151 490 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 NCAM2O15394 837 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 HOXC11O43248 304 aaPredicted RBP17.38■□□□□ 0.37
RNF40-206ENST00000564260 APOEP02649 317 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 KRT3P12035 628 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 CORO1AP31146 461 aaKnown RBP17.38■□□□□ 0.37
RNF40-206ENST00000564260 CCR1P32246 355 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 CTHP32929 405 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 GAD2Q05329 585 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 PPP2R5DQ14738 602 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 BRMS1LQ5PSV4 323 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 SYPL2Q5VXT5 272 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 ZNF557Q8N988 423 aaPredicted RBP17.38■□□□□ 0.37
RNF40-206ENST00000564260 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
RNF40-206ENST00000564260 ZFYVE19Q96K21 471 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 NPY6RQ99463 290 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 MFSD1Q9H3U5 465 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 EPHX3Q9H6B9 360 aa17.38■□□□□ 0.37
RNF40-206ENST00000564260 MRPL47Q9HD33 250 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms