RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 WDFY4Q6ZS81 3184 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF318Q5VUA4 2279 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 A0A1W2PQH9 124 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 C2CD4BA6NLJ0 364 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ESPNB1AK53 854 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 RNF8O76064 485 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 TUBB4AP04350 444 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 NCAM1P13591 858 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF143P52747 638 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-208ENST00000564247 GNG11P61952 73 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 HTR4Q13639 388 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ACAP1Q15027 740 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF569Q5MCW4 686 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 SCD5Q86SK9 330 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 TADA2BQ86TJ2 420 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ITFG1Q8TB96 612 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 BTBD6Q96KE9 485 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 SLC2A13Q96QE2 648 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 CDK5RAP1Q96SZ6 601 aaKnown RBP17.69■□□□□ 0.42
CMTM3-208ENST00000564247 CORO1BQ9BR76 489 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 DDX23Q9BUQ8 820 aaKnown RBP17.69■□□□□ 0.42
CMTM3-208ENST00000564247 ASAH2Q9NR71 780 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 CLIC5Q9NZA1 410 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 RAPGEFL1Q9UHV5 662 aa17.69■□□□□ 0.42
CMTM3-208ENST00000564247 MRPS23Q9Y3D9 190 aaKnown RBP17.69■□□□□ 0.42
CMTM3-208ENST00000564247 BUB1BO60566 1050 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-208ENST00000564247 PALMO75781 387 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 PROSCO94903 275 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 GBP1P32455 592 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 FLT3P36888 993 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 SLC1A1P43005 524 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 SLC5A9Q2M3M2 681 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 RSRC2Q7L4I2 434 aaKnown RBP17.68■□□□□ 0.42
CMTM3-208ENST00000564247 BHLHA9Q7RTU4 235 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 NPAS3Q8IXF0 933 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 SLC44A3Q8N4M1 653 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 LEMD2Q8NC56 503 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 EDEM1Q92611 657 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 IRX2Q9BZI1 471 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-208ENST00000564247 OLA1Q9NTK5 396 aaKnown RBP17.68■□□□□ 0.42
CMTM3-208ENST00000564247 TMEM51Q9NW97 253 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 NAALADL1Q9UQQ1 740 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 ARIH1Q9Y4X5 557 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-208ENST00000564247 ALG6Q9Y672 507 aa17.68■□□□□ 0.42
CMTM3-208ENST00000564247 MYO16Q9Y6X6 1858 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF840PA6NDX5 716 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 KIF2AO00139 706 aaPredicted RBP17.67■□□□□ 0.42
CMTM3-208ENST00000564247 DPYSL4O14531 572 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF197O14709 1029 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 ZDHHC11BP0C7U3 371 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 MYL4P12829 197 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 RARGP13631 454 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 CDC25CP30307 473 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 PTPN9P43378 593 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 EPHA5P54756 1037 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 SLC25A52Q3SY17 297 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 PRSS36Q5K4E3 855 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 SNX30Q5VWJ9 437 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 C11orf63Q6NUN7 778 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 MTSS1LQ765P7 747 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 FBXL6Q8N531 539 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF276Q8N554 614 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 MRPS31Q92665 395 aaKnown RBP17.67■□□□□ 0.42
CMTM3-208ENST00000564247 TRIM7Q9C029 511 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 NMUR1Q9HB89 426 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 GDE1Q9NZC3 331 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 AMFRQ9UKV5 643 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 NUMBLQ9Y6R0 609 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
CMTM3-208ENST00000564247 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SPOPO43791 374 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 F9P00740 461 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 F11P03951 625 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 FYNP06241 537 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 GABRR2P28476 465 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 MAN1A1P33908 653 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SULT1E1P49888 294 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 ATP11AP98196 1134 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 OGDHQ02218 1023 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 HADHQ16836 314 aaKnown RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 HECTD3Q5T447 861 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SYPL2Q5VXT5 272 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 PDZD4Q76G19 769 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SND1Q7KZF4 910 aaKnown RBP eCLIP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 PEX26Q7Z412 305 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SLFN11Q7Z7L1 901 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 HS6ST3Q8IZP7 471 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 ING5Q8WYH8 240 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 FGF14Q92915 247 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 CFAP57Q96MR6 1250 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 NACA2Q9H009 215 aa17.66■□□□□ 0.42
CMTM3-208ENST00000564247 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.66■□□□□ 0.42
CMTM3-208ENST00000564247 CAPN6Q9Y6Q1 641 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms