RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 XPO6Q96QU8 1125 aaKnown RBP16.84■□□□□ 0.29
RNF40-205ENST00000563909 LGMNQ99538 433 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 CPNE5Q9HCH3 593 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 CRTAC1Q9NQ79 661 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
RNF40-205ENST00000563909 F8VP50 259 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 CBX4O00257 560 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 ENC1O14682 589 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 GADD45BO75293 160 aaPredicted RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 RFPL3O75679 317 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 IL18RAPO95256 599 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 NTRK1P04629 796 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 C1SP09871 688 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 TYRP14679 529 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 LMO2P25791 158 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 DNAJC3Q13217 504 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 SOWAHAQ2M3V2 549 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 SLFN12LQ6IEE8 588 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 FAM124AQ86V42 546 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 ERICH1Q86X53 443 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 NT5DC4Q86YG4 428 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 FMR1NBQ8N0W7 255 aaPredicted RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 TOP6BLQ8N6T0 577 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 WBP2Q969T9 261 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 SIPA1Q96FS4 1042 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 NAF1Q96HR8 494 aaKnown RBP16.83■□□□□ 0.28
RNF40-205ENST00000563909 BBS2Q9BXC9 721 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 FLNCQ14315 2725 aa16.83■□□□□ 0.28
RNF40-205ENST00000563909 CACNG3O60359 315 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 KRT10P13645 584 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 TMPRSS3P57727 454 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 POU5F1Q01860 360 aaKnown RBP16.82■□□□□ 0.28
RNF40-205ENST00000563909 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
RNF40-205ENST00000563909 TBC1D25Q3MII6 688 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 KCNT1Q5JUK3 1230 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 BROXQ5VW32 411 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 LAYNQ6UX15 382 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 KRBA2Q6ZNG9 492 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 CACUL1Q86Y37 369 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 CSGALNACT2Q8N6G5 542 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 LRRC52Q8N7C0 313 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 C1orf127Q8N9H9 656 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 PRCCQ92733 491 aaPredicted RBP16.82■□□□□ 0.28
RNF40-205ENST00000563909 CNDP2Q96KP4 475 aaKnown RBP16.82■□□□□ 0.28
RNF40-205ENST00000563909 C8orf48Q96LL4 319 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 C7orf25Q9BPX7 421 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 TM9SF3Q9HD45 589 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 CDH9Q9ULB4 789 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 STYXL1Q9Y6J8 313 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 TMEM131Q92545 1883 aa16.82■□□□□ 0.28
RNF40-205ENST00000563909 LDOC1O95751 146 aaPredicted RBP16.81■□□□□ 0.28
RNF40-205ENST00000563909 IGLV3-19P01714 112 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 MYL1P05976 194 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 KRT19P08727 400 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 PDGFRBP09619 1106 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 IRF1P10914 325 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 ACADMP11310 421 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 AFMP43652 599 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 GRIA4P48058 902 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 DGKGP49619 791 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 COLEC12Q5KU26 742 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 HECTD3Q5T447 861 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 CNNM4Q6P4Q7 775 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 FBXL19Q6PCT2 694 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 GATAD2AQ86YP4 633 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 MED8Q96G25 268 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 PCED1BQ96HM7 432 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 DUSP9Q99956 384 aaKnown RBP16.81■□□□□ 0.28
RNF40-205ENST00000563909 TRIM9Q9C026 710 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 C6orf106Q9H6K1 298 aaPredicted RBP16.81■□□□□ 0.28
RNF40-205ENST00000563909 WDR35Q9P2L0 1181 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 CHORDC1Q9UHD1 332 aaPredicted RBP16.81■□□□□ 0.28
RNF40-205ENST00000563909 IL17BQ9UHF5 180 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 BOD1L1Q8NFC6 3051 aa16.81■□□□□ 0.28
RNF40-205ENST00000563909 SYNCRIPO60506 623 aaKnown RBP16.8■□□□□ 0.28
RNF40-205ENST00000563909 CISD3P0C7P0 127 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 IDEP14735 1019 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 GAP43P17677 238 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 UCNP55089 124 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 WNT7BP56706 349 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 TPGS1Q6ZTW0 290 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 ZNF248Q8NDW4 579 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 MYCBPAPQ8TBZ2 947 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 CACTINQ8WUQ7 758 aaKnown RBP16.8■□□□□ 0.28
RNF40-205ENST00000563909 KBTBD7Q8WVZ9 684 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 POMGNT1Q8WZA1 660 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 FAM84AQ96KN4 292 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms