RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 SMOC2Q9H3U7 446 aa28.18■■■□□ 2.1
SH3GL3-205ENST00000563901 SLITRK6Q9H5Y7 841 aa28.18■■■□□ 2.1
SH3GL3-205ENST00000563901 FAM204AQ9H8W3 233 aa28.18■■■□□ 2.1
SH3GL3-205ENST00000563901 MYO1FO00160 1098 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 TRUB2O95900 331 aaKnown RBP28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 TUBP50607 506 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 NME3Q13232 169 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 SLC25A52Q3SY17 297 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 NT5C3BQ969T7 300 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 RIPOR3Q96MK2 946 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 MARCH2Q9P0N8 246 aa28.17■■■□□ 2.1
SH3GL3-205ENST00000563901 HDCP19113 662 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 ATP5C1P36542 298 aaKnown RBP28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 PTPN9P43378 593 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 HADHBP55084 474 aaKnown RBP28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 ARHGAP15Q53QZ3 475 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 NPAS3Q8IXF0 933 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 ARFGAP1Q8N6T3 406 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 FAM172AQ8WUF8 416 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 CNPY3Q9BT09 278 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 PRDM6Q9NQX0 595 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 DDIT4Q9NX09 232 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 SMPD4Q9NXE4 827 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 STAP1Q9ULZ2 295 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 USTQ9Y2C2 406 aa28.16■■■□□ 2.1
SH3GL3-205ENST00000563901 OLFM2O95897 454 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 IGLV3-25P01717 112 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 HMBSP08397 361 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 MBL2P11226 248 aaPredicted RBP28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 ST13P5Q8NFI4 369 aaPredicted RBP28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 MAFAQ8NHW3 353 aaPredicted RBP28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 FNIP1Q8TF40 1166 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 HLA-CQ95604 372 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 TASP1Q9H6P5 420 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 OLA1Q9NTK5 396 aaKnown RBP28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 PIGVQ9NUD9 493 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 IP6K2Q9UHH9 426 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 DNMT3LQ9UJW3 386 aa28.15■■■□□ 2.1
SH3GL3-205ENST00000563901 TRAV19A0A0A6YYK7 116 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 GRID2IPA4D2P6 1211 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 CKMP06732 381 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 TCF4P15884 667 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 MTHFRP42898 656 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 ZXDBP98169 803 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 ZNF276Q8N554 614 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 SUSD6Q92537 303 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 FGF13Q92913 245 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 GKN1Q9NS71 199 aa28.14■■■□□ 2.1
SH3GL3-205ENST00000563901 SLC12A8A0AV02 714 aa28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 PROSCO94903 275 aa28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 SP100P23497 879 aaPredicted RBP28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 HDAC4P56524 1084 aa28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 BNIPLQ7Z465 357 aa28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 TTC16Q8NEE8 873 aa28.14■■■□□ 2.09
SH3GL3-205ENST00000563901 IRAK2O43187 625 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 DEUP1Q05D60 604 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 KLHDC10Q6PID8 442 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 TADA2BQ86TJ2 420 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 CMTM8Q8IZV2 173 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 CENPIQ92674 756 aaPredicted RBP28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 WBP2Q969T9 261 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 ZFRQ96KR1 1074 aaKnown RBP28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 MYADMQ96S97 322 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 CDK5RAP1Q96SZ6 601 aaKnown RBP28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 CCL26Q9Y258 94 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 CPQQ9Y646 472 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 COL6A3P12111 3177 aa28.13■■■□□ 2.09
SH3GL3-205ENST00000563901 MBTPS2O43462 519 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 PALMO75781 387 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 PRAMEF12O95522 483 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 IRF1P10914 325 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 DDX6P26196 483 aaKnown RBP eCLIP28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 DAAM2Q86T65 1068 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 TMPRSS4Q9NRS4 437 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 RRN3Q9NYV6 651 aa28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.12■■■□□ 2.09
SH3GL3-205ENST00000563901 SCAMP3O14828 347 aaKnown RBP28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 LRCH4O75427 683 aa28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 TFF2Q03403 129 aa28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 EIF4EBP2Q13542 120 aaPredicted RBP28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 PIGHQ14442 188 aaPredicted RBP28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 FAM131BQ86XD5 332 aa28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 NIPA2Q8N8Q9 360 aa28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 LRRC57Q8N9N7 239 aa28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 ZSCAN18Q8TBC5 510 aaPredicted RBP28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 KLF16Q9BXK1 252 aaPredicted RBP28.11■■■□□ 2.09
SH3GL3-205ENST00000563901 COMTP21964 271 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 RDXP35241 583 aaKnown RBP28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 KCNQ1P51787 676 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 SMAD4Q13485 552 aaKnown RBP28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 ZC3H12AQ5D1E8 599 aaKnown RBP28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 STRADAQ7RTN6 431 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 RNF10Q8N5U6 811 aaKnown RBP28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 SERPINB11Q96P15 392 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 ANLNQ9NQW6 1124 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 KCND1Q9NSA2 647 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 PCSK1NQ9UHG2 260 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 ENDOD1O94919 500 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 AVPR1AP37288 418 aa28.1■■■□□ 2.09
SH3GL3-205ENST00000563901 TBX4P57082 545 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms