RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 SOX9P48436 509 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 CYP24A1Q07973 514 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 PPP3CAQ08209 521 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 PSMD6Q15008 389 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 DDR2Q16832 855 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 SDHAF4Q5VUM1 108 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 FAM171BQ6P995 826 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 DAAM2Q86T65 1068 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 RALGPS2Q86X27 583 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 FAM71AQ8IYT1 594 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 BPIFB1Q8TDL5 484 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 PARD3BQ8TEW8 1205 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 TRMT2BQ96GJ1 504 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 FUBP3Q96I24 572 aaKnown RBP eCLIP16.91■□□□□ 0.34e-7■■■■■ 27.8
LPCAT4-205ENST00000563748 SMG9Q9H0W8 520 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 UBE2TQ9NPD8 197 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 DMGDHQ9UI17 866 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 GPR179Q6PRD1 2367 aa16.91■□□□□ 0.3
LPCAT4-205ENST00000563748 GOLGA6BA6NDN3 693 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 GOLGA8KD6RF30 607 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 SPECC1L-ADORA2AF8WAN1 911 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 LILRB5O75023 590 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 RTN2O75298 545 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 CTHP32929 405 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 MAGEA11P43364 429 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 PPP1R2P3Q6NXS1 205 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 TSSK4Q6SA08 328 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 MAATS1Q7Z4T9 603 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 SPATA2LQ8IUW3 424 aaPredicted RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 C1orf131Q8NDD1 294 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 CCDC26Q8TAB7 109 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 MYRFLQ96LU7 910 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 SYT15Q9BQS2 421 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 THG1LQ9NWX6 298 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 GTSE1Q9NYZ3 720 aa16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 HELZP42694 1942 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-205ENST00000563748 FOXN3O00409 490 aaPredicted RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 HSF2BPO75031 334 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 ATP2C2O75185 946 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 HEXIM1O94992 359 aaKnown RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 DLATP10515 647 aaKnown RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 WARSP23381 471 aaKnown RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 TNK2Q07912 1038 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 LRRC32Q14392 662 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 WDR44Q5JSH3 913 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 TXNDC11Q6PKC3 985 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 MON1AQ86VX9 555 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 MAB21L3Q8N8X9 362 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 RDH13Q8NBN7 331 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 FBXL13Q8NEE6 735 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 SLC35G2Q8TBE7 412 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 SHC3Q92529 594 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 MRPS31Q92665 395 aaKnown RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 USP13Q92995 863 aaPredicted RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 MS4A14Q96JA4 679 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 NT5C1BQ96P26 610 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 PSMB7Q99436 277 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 VPS18Q9P253 973 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 UXTQ9UBK9 157 aaPredicted RBP16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 CDH9Q9ULB4 789 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 CCL26Q9Y258 94 aa16.89■□□□□ 0.3
LPCAT4-205ENST00000563748 TMCO5BA8MYB1 307 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 BHMG1C9JSJ3 638 aaPredicted RBP16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 CEP104O60308 925 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 TNNI1P19237 187 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 LMO2P25791 158 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 AVPR1AP37288 418 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 GCLMP48507 274 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 CCR3P51677 355 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 CLDN10P78369 228 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 GCNT1Q02742 428 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 GAS6Q14393 721 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 ARHGAP44Q17R89 818 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 TXNDC8Q6A555 127 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 C4orf50Q6ZRC1 276 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 SND1Q7KZF4 910 aaKnown RBP eCLIP16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 TTC8Q8TAM2 541 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 CCDC127Q96BQ5 260 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 FNBP1Q96RU3 617 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 RUFY1Q96T51 708 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 FAM83CQ9BQN1 747 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 KIF9Q9HAQ2 790 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 CRTAC1Q9NQ79 661 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 TDP1Q9NUW8 608 aa16.89■□□□□ 0.29
LPCAT4-205ENST00000563748 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 RNF40O75150 1001 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 SYF2O95926 243 aaKnown RBP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 CST3P01034 146 aaPredicted RBP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 MYBL2P10244 700 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 DLG4P78352 724 aa16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
LPCAT4-205ENST00000563748 PPP2R5DQ14738 602 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms