RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 LGMNQ99538 433 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 PLIN2Q99541 437 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 BBS2Q9BXC9 721 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ST6GALNAC4Q9H4F1 302 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 IL17BQ9UHF5 180 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 ITGA11Q9UKX5 1188 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 SLC27A6Q9Y2P4 619 aa8.19□□□□□ -1.1
HERPUD1-206ENST00000563343 TDRD6O60522 2096 aaKnown RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 KIF26BQ2KJY2 2108 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 AHCTF1Q8WYP5 2266 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 LDOC1O95751 146 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PDGFRBP09619 1106 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 IRF1P10914 325 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PRKCHP24723 683 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 YWHAQP27348 245 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 TUBP50607 506 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 UCNP55089 124 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 IFRD2Q12894 506 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 ZNF234Q14588 700 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 STARD3Q14849 445 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 TEAD4Q15561 434 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 MAPRE1Q15691 268 aaKnown RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 GEN1Q17RS7 908 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 INAVAQ3KP66 663 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 MDH1BQ5I0G3 518 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PPP1R15BQ5SWA1 713 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 HECTD3Q5T447 861 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 LCE2DQ5TA82 110 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 SLFN12LQ6IEE8 588 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 TPGS1Q6ZTW0 290 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 FAM124AQ86V42 546 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 NUP93Q8N1F7 819 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 MYCT1Q8N699 235 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 CSGALNACT2Q8N6G5 542 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 DCBLD1Q8N8Z6 715 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 SCAMP5Q8TAC9 235 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 SAP25Q8TEE9 199 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 SNX19Q92543 992 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PRCCQ92733 491 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 FBXO32Q969P5 355 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 STRA6Q9BX79 667 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 TRIM4Q9C037 500 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 ZNF518BQ9C0D4 1074 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PARVGQ9HBI0 331 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 BLOC1S4Q9NUP1 217 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 WDR35Q9P2L0 1181 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 CHORDC1Q9UHD1 332 aaPredicted RBP8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 PTPRJQ12913 1337 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 LRRK2Q5S007 2527 aa8.18□□□□□ -1.1
HERPUD1-206ENST00000563343 RELNP78509 3460 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 CLDN5O00501 218 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 LAD1O00515 517 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 NPC1O15118 1278 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 VILLO15195 856 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 DFNA5O60443 496 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 WNT1P04628 370 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 IGHV4-34P06331 123 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 CD27P26842 260 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 MFAP3P55082 362 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 RBP5P82980 135 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 ILKQ13418 452 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 ANKRD1Q15327 319 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 ZRSR1Q15695 479 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 PRAMEF14Q5SWL7 426 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 Q6ZNB5 142 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 KANSL1Q7Z3B3 1105 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 GPBP1Q86WP2 473 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 CACUL1Q86Y37 369 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 FBXO18Q8NFZ0 1043 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 NAF1Q96HR8 494 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 PIWIL1Q96J94 861 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 ELF4Q99607 663 aaPredicted RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 ARID3AQ99856 593 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 MRPL45Q9BRJ2 306 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 B3GNT5Q9BYG0 378 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 MTMR12Q9C0I1 747 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 DPEP3Q9H4B8 488 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 EBF2Q9HAK2 575 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 PLK2Q9NYY3 685 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 CLCA2Q9UQC9 943 aa8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 TLN1Q9Y490 2541 aaKnown RBP8.17□□□□□ -1.1
HERPUD1-206ENST00000563343 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 FAM13AO94988 1023 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 RTN3O95197 1032 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 TBX18O95935 607 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 KRT19P08727 400 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 GLDCP23378 1020 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 ABCD1P33897 745 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 SKOR1P84550 965 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 KCNA1Q09470 495 aa8.16□□□□□ -1.1
HERPUD1-206ENST00000563343 CAMK2GQ13555 558 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms