RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CKMP06732 381 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 GSTA1P08263 222 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 GSTA2P09210 222 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 SAT1P21673 171 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 MAGEA4P43358 317 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 ITGA8P53708 1063 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PKN2Q16513 984 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ACTL9Q8TC94 416 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 HASPINQ8TF76 798 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 IRGQQ8WZA9 623 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 ARHGEF2Q92974 986 aaKnown RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 ASIC4Q96FT7 647 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 PRELID1Q9Y255 219 aa7.81□□□□□ -1.16
TCF4-216ENST00000562680 TIMM13Q9Y5L4 95 aaPredicted RBP7.81□□□□□ -1.16
TCF4-216ENST00000562680 O00370 1275 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 TMCC1O94876 653 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 POLBP06746 335 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MYBL2P10244 700 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 RARGP13631 454 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MIPP30301 263 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 TM4SF4P48230 202 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 RPS6KA2Q15349 733 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 SLC10A6Q3KNW5 377 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ARHGAP17Q68EM7 881 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 APTXQ7Z2E3 356 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 TMEM139Q8IV31 216 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 VPS37AQ8NEZ2 397 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 KCNV2Q8TDN2 545 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 UCMAQ8WVF2 138 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 PABPC5Q96DU9 382 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 BTBD6Q96KE9 485 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 SPATA17Q96L03 361 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MUC3BQ9H195 1237 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 DYRK4Q9NR20 520 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 PSMC3IPQ9P2W1 217 aaPredicted RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 ADAM21Q9UKJ8 722 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 IGKV6-21A0A0C4DH24 114 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 C2CD2LO14523 706 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 OPHN1O60890 802 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 RGS20O76081 388 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MTA2O94776 668 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 TTC4O95801 387 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 HMBSP08397 361 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 HTR7P34969 479 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 RFC2P35250 354 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 SCNN1AP37088 669 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MRPS25P82663 173 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 SLC39A12Q504Y0 691 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 PLEKHA7Q6IQ23 1121 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 DENND5BQ6ZUT9 1274 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 STRADAQ7RTN6 431 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 FAM35AQ86V20 835 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 NPAS4Q8IUM7 802 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 PSTKQ8IV42 348 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 MCUR1Q96AQ8 359 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MS4A4AQ96JQ5 239 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ZC4H2Q9NQZ6 224 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 TBK1Q9UHD2 729 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ANGPTL3Q9Y5C1 460 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 BRWD3Q6RI45 1802 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 KCNE1P15382 129 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 WARSP23381 471 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 CYP2F1P24903 491 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 GGCXP38435 758 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 EFEMP1Q12805 493 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MORN1Q5T089 497 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 MAP3K21Q5TCX8 1036 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 C2orf15Q8WU43 125 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 TEKT4Q8WW24 435 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 RMDN1Q96DB5 314 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 EIF2AQ9BY44 585 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 PABPC3Q9H361 631 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 RCOR3Q9P2K3 495 aaPredicted RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 FAF1Q9UNN5 650 aaPredicted RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 GOLGA8MH3BSY2 632 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 GPC4O75487 556 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 BRAFP15056 766 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 KCNJ1P48048 391 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 CDH18Q13634 790 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 DDX42Q86XP3 938 aaKnown RBP eCLIP7.8□□□□□ -1.16
TCF4-216ENST00000562680 IQCF2Q8IXL9 164 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 DPF3Q92784 378 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 GRAMD1AQ96CP6 724 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ACBD6Q9BR61 282 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ZNF670Q9BS34 389 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 UBXN6Q9BZV1 441 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 PARVBQ9HBI1 364 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 DRG1Q9Y295 367 aaKnown RBP7.8□□□□□ -1.16
TCF4-216ENST00000562680 CLUHO75153 1309 aa7.8□□□□□ -1.16
TCF4-216ENST00000562680 ERI2A8K979 691 aaKnown RBP7.79□□□□□ -1.16
TCF4-216ENST00000562680 CSPG5O95196 566 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 ADH1AP07327 375 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CCDC130P13994 396 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 BDNFP23560 247 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 PCYT1AP49585 367 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 RENBPP51606 427 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 CDK16Q00536 496 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 PTP4A2Q12974 167 aa7.79□□□□□ -1.16
TCF4-216ENST00000562680 BRMS1LQ5PSV4 323 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms