RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 DCXO43602 365 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 STC2O76061 302 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 F9P00740 461 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 HARS2P49590 506 aaKnown RBP17.07■□□□□ 0.32
USB1-206ENST00000562534 MRE11P49959 708 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 NNTQ13423 1086 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 TRIP4Q15650 581 aaPredicted RBP17.07■□□□□ 0.32
USB1-206ENST00000562534 ASTE1Q2TB18 679 aaPredicted RBP17.07■□□□□ 0.32
USB1-206ENST00000562534 UNC45BQ8IWX7 931 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 ADGRG2Q8IZP9 1017 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 PLD4Q96BZ4 506 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
USB1-206ENST00000562534 SELENOOQ9BVL4 669 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 SMOC2Q9H3U7 446 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 PARVAQ9NVD7 372 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 WNT16Q9UBV4 365 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 TLR6Q9Y2C9 796 aa17.07■□□□□ 0.32
USB1-206ENST00000562534 ANKRD62A6NC57 917 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 TNFRSF10AO00220 468 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 DAB1O75553 588 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 TRUB2O95900 331 aaKnown RBP17.06■□□□□ 0.32
USB1-206ENST00000562534 IFNAR2P48551 515 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 MLLT6P55198 1093 aaPredicted RBP17.06■□□□□ 0.32
USB1-206ENST00000562534 TBX4P57082 545 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 ZXDAP98168 799 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 RING1Q06587 406 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 NR1H3Q13133 447 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 PHLDB2Q86SQ0 1253 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 TMTC1Q8IUR5 882 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 SPC24Q8NBT2 197 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 CSGALNACT1Q8TDX6 532 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 DQX1Q8TE96 717 aaKnown RBP17.06■□□□□ 0.32
USB1-206ENST00000562534 EDAQ92838 391 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 DNASE1L2Q92874 299 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 NT5C3BQ969T7 300 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
USB1-206ENST00000562534 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
USB1-206ENST00000562534 MRPL47Q9HD33 250 aaKnown RBP17.06■□□□□ 0.32
USB1-206ENST00000562534 NUP210Q8TEM1 1887 aaPredicted RBP17.05■□□□□ 0.32
USB1-206ENST00000562534 PI4K2BG5E9Z4 385 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 NARSO43776 548 aaKnown RBP17.05■□□□□ 0.32
USB1-206ENST00000562534 HMBSP08397 361 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 IRF1P10914 325 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 SLC2A3P11169 496 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 GLULP15104 373 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 PDGFRAP16234 1089 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 RRM1P23921 792 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 GSDMDP57764 484 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
USB1-206ENST00000562534 MTA1Q13330 715 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 RUNX3Q13761 415 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 SLC25A52Q3SY17 297 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 C10orf76Q5T2E6 689 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 NUGGCQ68CJ6 796 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 PLEKHA7Q6IQ23 1121 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 DNAJC24Q6P3W2 148 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 RIN3Q8TB24 985 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
USB1-206ENST00000562534 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 AZIN2Q96A70 460 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 NPY6RQ99463 290 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 METTL5Q9NRN9 209 aaKnown RBP17.05■□□□□ 0.32
USB1-206ENST00000562534 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.05■□□□□ 0.32
USB1-206ENST00000562534 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
USB1-206ENST00000562534 TCRBV5S1A1TA0A578 114 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 M0QYT0 321 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 GREM1O60565 184 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 IGLV3-25P01717 112 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 DESP17661 470 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 RFC1P35251 1148 aaPredicted RBP17.04■□□□□ 0.32
USB1-206ENST00000562534 CHKAP35790 457 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 AMPD2Q01433 879 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 MAMLD1Q13495 774 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
USB1-206ENST00000562534 GSE1Q14687 1217 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 ITPRIPL2Q3MIP1 535 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 SLC44A4Q53GD3 710 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 DCUN1D2Q6PH85 259 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 SND1Q7KZF4 910 aaKnown RBP eCLIP17.04■□□□□ 0.32
USB1-206ENST00000562534 RXFP2Q8WXD0 754 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 PGAP3Q96FM1 320 aaPredicted RBP17.04■□□□□ 0.32
USB1-206ENST00000562534 SLC39A13Q96H72 371 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 ZFYVE19Q96K21 471 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 DDIT4Q9NX09 232 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
USB1-206ENST00000562534 FBXL21Q9UKT6 434 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 PAXBP1Q9Y5B6 917 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 UNC80Q8N2C7 3258 aa17.04■□□□□ 0.32
USB1-206ENST00000562534 C2CD4BA6NLJ0 364 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 ARNTLO00327 626 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 IRAK2O43187 625 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 MSI1O43347 362 aaKnown RBP17.03■□□□□ 0.32
USB1-206ENST00000562534 NFATC1O95644 943 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 LATS1O95835 1130 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 IGLV3-27P01718 113 aa17.03■□□□□ 0.32
USB1-206ENST00000562534 KLKB1P03952 638 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms