RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 ALDH1A3P47895 512 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CXCR3P49682 368 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 LMNB2Q03252 620 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 NNTQ13423 1086 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 SDHAF4Q5VUM1 108 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 KAZNQ674X7 775 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CCDC137Q6PK04 289 aaKnown RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 SYDE1Q6ZW31 735 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 TAC4Q86UU9 113 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 RFX6Q8HWS3 928 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 IFT20Q8IY31 132 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 CCDC185Q8N715 623 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 FAF2Q96CS3 445 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 PNKPQ96T60 521 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 HERPUD2Q9BSE4 406 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 DHX35Q9H5Z1 703 aaKnown RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 WDR6Q9NNW5 1121 aaKnown RBP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.85□□□□□ -0.03
COMMD4-205ENST00000562310 GMIPQ9P107 970 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 YIPF1Q9Y548 306 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 IRAK3Q9Y616 596 aa14.85□□□□□ -0.03
COMMD4-205ENST00000562310 LINC01553A4QN01 128 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 C5orf67F2Z3F1 127 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 H3BRJ5 948 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 APOC4-APOC2K7ER74 178 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 PRRG1O14668 218 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 IRAK2O43187 625 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 SOAT2O75908 522 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ECEL1O95672 775 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 GAS8O95995 478 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 APOC2P02655 101 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 RB1P06400 928 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ADH1AP07327 375 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 KRT10P13645 584 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ZFXP17010 805 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 TGM2P21980 687 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 L1CAMP32004 1257 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ARL4AP40617 200 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ATXN1P54253 815 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 USP46P62068 366 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 PITX1P78337 314 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 MAP9Q49MG5 647 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ZC3H12AQ5D1E8 599 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ANKS1BQ7Z6G8 1248 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 TADA2BQ86TJ2 420 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 CCDC105Q8IYK2 499 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ZDHHC14Q8IZN3 488 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 ZNF276Q8N554 614 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 EIF1ADQ8N9N8 165 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 TRMT2BQ96GJ1 504 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 EMILIN2Q9BXX0 1053 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 UBE2OQ9C0C9 1292 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 NMUR1Q9HB89 426 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 CYP4F11Q9HBI6 524 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 GPATCH2LQ9NWQ4 482 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 CALCOCO1Q9P1Z2 691 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 AMACRQ9UHK6 382 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 FBXW11Q9UKB1 542 aa14.84□□□□□ -0.03
COMMD4-205ENST00000562310 UTP11Q9Y3A2 253 aaKnown RBP14.84□□□□□ -0.03
COMMD4-205ENST00000562310 SYNJ2BP-COX16A0A087WUM0 186 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 LCHNA4D1U4 455 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 TEX28O15482 410 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 CST8O60676 142 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 LPXNO60711 386 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 SEC24AO95486 1093 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 C1RP00736 705 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 CD48P09326 243 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ZDHHC11BP0C7U3 371 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 SLC2A3P11169 496 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ADRA1BP35368 520 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 TAF10Q12962 218 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 MTA1Q13330 715 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 CUL1Q13616 776 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 PPP2R5DQ14738 602 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 LLGL1Q15334 1064 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ANKRD20A8PQ5CZ79 823 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 PPP6R3Q5H9R7 873 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 TMC7Q7Z402 723 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 JAMLQ86YT9 394 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ADAM32Q8TC27 787 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 C1orf54Q8WWF1 131 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 AUTS2Q8WXX7 1259 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 NKD2Q969F2 451 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 KCTD15Q96SI1 283 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 WDCPQ9H6R7 721 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 ENTPD7Q9NQZ7 604 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 COX16Q9P0S2 106 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 UXTQ9UBK9 157 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 DMGDHQ9UI17 866 aaKnown RBP14.83□□□□□ -0.04
COMMD4-205ENST00000562310 INSL5Q9Y5Q6 135 aa14.83□□□□□ -0.04
COMMD4-205ENST00000562310 APOL1O14791 398 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms