RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 HOXA9P31269 272 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 GBP1P32455 592 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 PPP3CCP48454 512 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 CXCR3P49682 368 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 ARSEP51690 589 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 CKAP4Q07065 602 aaKnown RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 NME3Q13232 169 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 NNTQ13423 1086 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 DUSP6Q16828 381 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 PPM1LQ5SGD2 360 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 SCYL2Q6P3W7 929 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 RSRC2Q7L4I2 434 aaKnown RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 FAM131BQ86XD5 332 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 TMC8Q8IU68 726 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 PSTKQ8IV42 348 aaKnown RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 RCOR2Q8IZ40 523 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 CCDC185Q8N715 623 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 CMASQ8NFW8 434 aaPredicted RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 RAPGEF5Q92565 580 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 NTAN1Q96AB6 310 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 MRPL38Q96DV4 380 aaKnown RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 CDK5RAP1Q96SZ6 601 aaKnown RBP11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 LRRC3Q9BY71 257 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 IL21Q9HBE4 155 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 TMEM51Q9NW97 253 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 COX16Q9P0S2 106 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 NUDT5Q9UKK9 219 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
AC009054.2-201ENST00000561956 A0A1W2PPC1 479 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 LRRD1A4D1F6 860 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 RFXAPO00287 272 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 PER2O15055 1255 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TLR5O60602 858 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 F11P03951 625 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 POU2F2P09086 479 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 PTPN7P35236 360 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 PAFAH1B1P43034 410 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TUBP50607 506 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 AIF1P55008 147 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 COPS2P61201 443 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 SCAPQ12770 1279 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TAZQ16635 292 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 LRIT3Q3SXY7 679 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 BRMS1LQ5PSV4 323 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 CCDC181Q5TID7 509 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 AADACL2Q6P093 401 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 MFSD7Q6UXD7 560 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 ANKS1BQ7Z6G8 1248 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TMEM150AQ86TG1 271 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TADA2BQ86TJ2 420 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 ELMOD1Q8N336 334 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 CEP112Q8N8E3 955 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 FAM71BQ8TC56 605 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 HSPH1Q92598 858 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 SERPINB11Q96P15 392 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 CDCA3Q99618 268 aaPredicted RBP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 CARD6Q9BX69 1037 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TLE6Q9H808 572 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 AP4E1Q9UPM8 1137 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 HCFC2Q9Y5Z7 792 aa11.28□□□□□ -0.6
AC009054.2-201ENST00000561956 TRIOBPQ9H2D6 2365 aa11.27□□□□□ -0.6
AC009054.2-201ENST00000561956 MYO9BQ13459 2157 aa11.27□□□□□ -0.6
AC009054.2-201ENST00000561956 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 CCL16O15467 120 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 MSI1O43347 362 aaKnown RBP11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 RFPL2O75678 378 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 SLU7O95391 586 aaKnown RBP11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 PAPLNO95428 1278 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 TBX18O95935 607 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 FGGP02679 453 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 KDELR1P24390 212 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 ADRA1BP35368 520 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 CDKN2BP42772 138 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 NRIP1P48552 1158 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 EPHA5P54756 1037 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 CDH6P55285 790 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 EFEMP1Q12805 493 aa11.27□□□□□ -0.61
AC009054.2-201ENST00000561956 KCNC3Q14003 757 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms