RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TEX264Q9Y6I9 313 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 AP1G2O75843 785 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 FBXO21O94952 628 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 GOT1P17174 413 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 AMPD1P23109 780 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 CD52P31358 61 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 STX2P32856 288 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 RAB27AP51159 221 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SLC18A1P54219 525 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 PITX1P78337 314 aaPredicted RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 ITIH4Q14624 930 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 FAXCQ5TGI0 409 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ADGRD1Q6QNK2 874 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 CCDC121Q6ZUS5 278 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 IGDCC3Q8IVU1 814 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 PYROXD2Q8N2H3 581 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 KLHDC9Q8NEP7 349 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 LRRN4Q8WUT4 740 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 MRRFQ96E11 262 aaKnown RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 MAGEB18Q96M61 343 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SMC6Q96SB8 1091 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 PAFAH2Q99487 392 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SMOQ99835 787 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 RASSF4Q9H2L5 321 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 CDH9Q9ULB4 789 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ABT1Q9ULW3 272 aaKnown RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 PADI3Q9ULW8 664 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 TIMM13Q9Y5L4 95 aaPredicted RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 PTCH2Q9Y6C5 1203 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 GOLGA6L7A0A1B0GV03 622 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 MYBPHLA2RUH7 354 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 MGEA5O60502 916 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ZNF623O75123 536 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SPAG7O75391 227 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 GCATO75600 419 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 CCND3P30281 292 aaPredicted RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 LIG3P49916 1009 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 DSC3Q14574 896 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 KCNA10Q16322 511 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 UPP1Q16831 310 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 FAM182AQ5T1J6 154 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 SYCP2LQ5T4T6 812 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 KCNT2Q6UVM3 1135 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 HFE2Q6ZVN8 426 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ANKS4BQ8N8V4 417 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 PCED1BQ96HM7 432 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ELAC2Q9BQ52 826 aaKnown RBP10.17□□□□□ -0.78
SMG1-205ENST00000561947 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ULBP1Q9BZM6 244 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 ETNK1Q9HBU6 452 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 POPDC2Q9HBU9 364 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 DTLQ9NZJ0 730 aa10.17□□□□□ -0.78
SMG1-205ENST00000561947 KBTBD13C9JR72 458 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 H3BRJ5 948 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 M0QYT0 321 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 NRP1O14786 923 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 SPAG6O75602 509 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 DGKIO75912 1065 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 MYCNP04198 464 aaPredicted RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 GHRP10912 638 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 CST5P28325 142 aaPredicted RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 MSH2P43246 934 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 WDR4P57081 412 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 DAOAP59103 153 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 IL9RQ01113 521 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 DEUP1Q05D60 604 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 TIGD5Q53EQ6 642 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 SYPL2Q5VXT5 272 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 CCSAPQ6IQ19 270 aaPredicted RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 AGGF1Q8N302 714 aaeCLIP10.16□□□□□ -0.78
SMG1-205ENST00000561947 MCUQ8NE86 351 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 ZMIZ2Q8NF64 920 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 DENND1AQ8TEH3 1009 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 DCAKDQ8WVC6 231 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 OLFM3Q96PB7 478 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 CYTH2Q99418 400 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 MFHAS1Q9Y4C4 1052 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 THSD7BQ9C0I4 1608 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 SYNJ2BP-COX16A0A087WUM0 186 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 A0A1W2PPM1 405 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 AVILO75366 819 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 OAS1P00973 400 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 PCSK1P29120 753 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 RABGGTBP53611 331 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 YWHAGP61981 247 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMG1-205ENST00000561947 LPIN1Q14693 890 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 RAB41Q5JT25 222 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 NUGGCQ68CJ6 796 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 HEATR6Q6AI08 1181 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 BZW1Q7L1Q6 419 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 C4orf33Q8N1A6 199 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms