RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 XPO6Q96QU8 1125 aaKnown RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 RTKNQ9BST9 563 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 SRRTQ9BXP5 876 aaKnown RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 ULBP1Q9BZM6 244 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 SMOC1Q9H4F8 434 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 RXFP3Q9NSD7 469 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 PLK2Q9NYY3 685 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 MARCH2Q9P0N8 246 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 HESX1Q9UBX0 185 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 RASAL2Q9UJF2 1139 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 AGO1Q9UL18 857 aaKnown RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 ZNF510Q9Y2H8 683 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 PCDHB4Q9Y5E5 795 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 PCDHGA5Q9Y5G8 931 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 TCRBV21S2A2A0A5A6 115 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 PRRT4C9JH25 899 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 SLC30A4O14863 429 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 GABBR2O75899 941 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 GNA14O95837 355 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 CALCAP01258 141 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 PAEPP09466 180 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 BCKDHBP21953 392 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 MPLP40238 635 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 ADIGQ0VDE8 80 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 PAK1Q13153 545 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 CAMK4Q16566 473 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
CLK3-205ENST00000561673 EGFLAMQ63HQ2 1017 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 LCLAT1Q6UWP7 414 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 RSRC2Q7L4I2 434 aaKnown RBP10.78□□□□□ -0.68
CLK3-205ENST00000561673 TRMT11Q7Z4G4 463 aaKnown RBP10.78□□□□□ -0.68
CLK3-205ENST00000561673 ARHGEF19Q8IW93 802 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 FRMD1Q8N878 549 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 SLC35F5Q8WV83 523 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 HMGB4Q8WW32 186 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 KCTD13Q8WZ19 329 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
CLK3-205ENST00000561673 ACOX2Q99424 681 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 DCLK3Q9C098 648 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 LRRC4Q9HBW1 653 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 POLMQ9NP87 494 aaPredicted RBP10.78□□□□□ -0.68
CLK3-205ENST00000561673 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 FBXO10Q9UK96 956 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 MYO16Q9Y6X6 1858 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 MYOFQ9NZM1 2061 aa10.78□□□□□ -0.68
CLK3-205ENST00000561673 MYH10P35580 1976 aa10.77□□□□□ -0.68
CLK3-205ENST00000561673 A0A1W2PQF6 199 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 BCLAF3A2AJT9 711 aaKnown RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 YJEFN3A6XGL0 299 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 E7ENQ6 273 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 CAVIN2O95810 425 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 PENKP01210 267 aaPredicted RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 AFPP02771 609 aaKnown RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 SETSIPP0DME0 302 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 LCP1P13796 627 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 NTSR1P30989 418 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 CHKAP35790 457 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 P2RY2P41231 377 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 WASP42768 502 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 DGKGP49619 791 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 MARSP56192 900 aaKnown RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 UBE2HP62256 183 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 CREB5Q02930 508 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 CNGA2Q16280 664 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 FYB2Q5VWT5 728 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 PMS2CLQ68D20 193 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 PMF1Q6P1K2 205 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 C11orf74Q86VG3 221 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 DENND1CQ8IV53 801 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 FMNL3Q8IVF7 1028 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 C12orf50Q8NA57 414 aaPredicted RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 EDEM1Q92611 657 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 KREMEN1Q96MU8 473 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 VPS45Q9NRW7 570 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLK3-205ENST00000561673 SFMBT1Q9UHJ3 866 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 MBD1Q9UIS9 605 aaPredicted RBP10.77□□□□□ -0.69
CLK3-205ENST00000561673 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLK3-205ENST00000561673 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLK3-205ENST00000561673 KIAA1549LQ6ZVL6 1849 aa10.77□□□□□ -0.69
CLK3-205ENST00000561673 SDK1Q7Z5N4 2213 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 M0QYV0 167 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 PIK3R2O00459 728 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 HOXB2P14652 356 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 RGS7P49802 495 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 ZNF132P52740 706 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 DAOAP59103 153 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 GCNT1Q02742 428 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 TRIP4Q15650 581 aaPredicted RBP10.76□□□□□ -0.69
CLK3-205ENST00000561673 MAP7D1Q3KQU3 841 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 KIAA1211LQ6NV74 962 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms