RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TRIP6Q15654 476 aaKnown RBP12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 C10orf120Q5SQS8 335 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 SPOPLQ6IQ16 392 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CCDC186Q7Z3E2 898 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CHCHD4Q8N4Q1 142 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 TWNKQ96RR1 684 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CYP3A43Q9HB55 503 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CD93Q9NPY3 652 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 ITM2CQ9NQX7 267 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CLIC5Q9NZA1 410 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 USP3Q9Y6I4 520 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 STON1Q9Y6Q2 735 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
CARMIL3-204ENST00000561354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 MDM4O15151 490 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 SH3BP5O60239 455 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PENKP01210 267 aaPredicted RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 HLA-DRAP01903 254 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 KLKB1P03952 638 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 RALAP11233 206 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 CHKAP35790 457 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PIK3CAP42336 1068 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 MFAP3P55082 362 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 COG7P83436 770 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 RING1Q06587 406 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 E2F5Q15329 346 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 FUT11Q495W5 492 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 ATL3Q6DD88 541 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 SCD5Q86SK9 330 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 ADAMTS14Q8WXS8 1223 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 JAKMIP2Q96AA8 810 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 ERLEC1Q96DZ1 483 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 P2RY11Q96G91 374 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 TOE1Q96GM8 510 aaKnown RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 CDK5RAP1Q96SZ6 601 aaKnown RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 IMPG2Q9BZV3 1241 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 DCLK3Q9C098 648 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PRDM16Q9HAZ2 1276 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 EXOC1Q9NV70 894 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PLK2Q9NYY3 685 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 USP36Q9P275 1121 aaKnown RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 THAP10Q9P2Z0 257 aaPredicted RBP12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 NAGPAQ9UK23 515 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 PCDHB9Q9Y5E1 797 aa12.44□□□□□ -0.42
CARMIL3-204ENST00000561354 A0A1B0GTW7 788 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 TAF4O00268 1085 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 CILPO75339 1184 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 MYL1P05976 194 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 MAOBP27338 520 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 OXTRP30559 389 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 VAMP7P51809 220 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 ENPEPQ07075 957 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 GRIK2Q13002 908 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 COL9A2Q14055 689 aaPredicted RBP12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 FYB2Q5VWT5 728 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 GLRX5Q86SX6 157 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 PROSER1Q86XN7 944 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 NAXDQ8IW45 347 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 UCMAQ8WVF2 138 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 BHMTQ93088 406 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 CAMK1GQ96NX5 476 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 DUSP16Q9BY84 665 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 SERTAD1Q9UHV2 236 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 LHX6Q9UPM6 363 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 TRAF3IP3Q9Y228 551 aa12.43□□□□□ -0.42
CARMIL3-204ENST00000561354 MEI4A8MW99 385 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 CALUO43852 315 aaPredicted RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 F13A1P00488 732 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 IGLV3-19P01714 112 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 FTH1P19P0C7X4 201 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 ZNF883P0CG24 379 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 ZSCAN22P10073 491 aaPredicted RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 NCAM1P13591 858 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 IL12RB1P42701 662 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 TPMTP51580 245 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 EIF4HQ15056 248 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 NFIL3Q16649 462 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 GEN1Q17RS7 908 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
CARMIL3-204ENST00000561354 CPXM2Q8N436 756 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms