RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MATKP42679 507 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 STARD6P59095 220 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 PRKCQQ04759 706 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 EFEMP1Q12805 493 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 TAF5Q15542 800 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 ASTE1Q2TB18 679 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 C1orf228Q6PIY5 440 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 MMS22LQ6ZRQ5 1243 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 TRIM67Q6ZTA4 783 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 TMC6Q7Z403 805 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 VPS36Q86VN1 386 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 FAM217AQ8IXS0 508 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 MCOLN2Q8IZK6 566 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 DEFB106AQ8N104 65 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 C3orf20Q8ND61 904 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 WBP2Q969T9 261 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 MSANTD3Q96H12 275 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC39A13Q96H72 371 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 SERPINB11Q96P15 392 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 NPY6RQ99463 290 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 C8orf33Q9H7E9 229 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 HPS4Q9NQG7 708 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 DUS2Q9NX74 493 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 SMPD4Q9NXE4 827 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 ADAMTS1Q9UHI8 967 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 RASAL2Q9UJF2 1139 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 SH3BP1Q9Y3L3 701 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNF318Q5VUA4 2279 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 A0A087X0T9 212 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SIGLEC16A6NMB1 481 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 CAPN9O14815 690 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 IRAK2O43187 625 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ENDOD1O94919 500 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 TRUB2O95900 331 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 KLKB1P03952 638 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FAM228BP0C875 321 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FECHP22830 423 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 RUNX3Q13761 415 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ITPRIPL2Q3MIP1 535 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC25A52Q3SY17 297 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC44A4Q53GD3 710 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 C2CD6Q53TS8 623 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 TDRD12Q587J7 1177 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 DCAF6Q58WW2 860 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FAM102AQ5T9C2 384 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 NUGGCQ68CJ6 796 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 PLEKHA7Q6IQ23 1121 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 MIB1Q86YT6 1006 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 UNC45BQ8IWX7 931 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 CPXM2Q8N436 756 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 DQX1Q8TE96 717 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ZFYVE19Q96K21 471 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FCRL2Q96LA5 508 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 PANX2Q96RD6 677 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 LINC00597Q9H2U6 94 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 EPHX3Q9H6B9 360 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ECT2Q9H8V3 914 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 TAS2R14Q9NYV8 317 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 GTSE1Q9NYZ3 720 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 IMPACTQ9P2X3 320 aa10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 LSM7Q9UK45 103 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-221ENST00000561055 KRBA1A5PL33 1030 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 OTOL1A6NHN0 477 aaPredicted RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 C2CD4BA6NLJ0 364 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 GFRA2O00451 464 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 GPR37L1O60883 481 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 ADCY5O95622 1261 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 NFATC1O95644 943 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 F9P00740 461 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 MYBL1P10243 752 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 KRT3P12035 628 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 GBP1P32455 592 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 CHKAP35790 457 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 FLT3P36888 993 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 IFNAR2P48551 515 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 HARS2P49590 506 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 TBX4P57082 545 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 NR1H3Q13133 447 aa10.03□□□□□ -0.8
RABGGTA-221ENST00000561055 MTA1Q13330 715 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms