RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 EPN1Q9Y6I3 576 aaPredicted RBP7.36□□□□□ -1.23
CTDSPL2-210ENST00000560834 C2CD4BA6NLJ0 364 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MDM4O15151 490 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 COCHO43405 550 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 TLR5O60602 858 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 PRAMEF12O95522 483 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 H2AFZP0C0S5 128 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 RARGP13631 454 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 TFE3P19532 575 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 FSHRP23945 695 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 FCARP24071 287 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 DDX6P26196 483 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MAGEA1P43355 309 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 VAV2P52735 878 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 SNX16P57768 344 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 RPL7AP62424 266 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 VAC14Q08AM6 782 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MAMLD1Q13495 774 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 EIF4EBP2Q13542 120 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 EFHC1Q5JVL4 640 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 C10orf76Q5T2E6 689 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 GPR158Q5T848 1215 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 TXNDC8Q6A555 127 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 CES5AQ6NT32 575 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 H2AFVQ71UI9 128 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 ARCQ7LC44 396 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 TAC4Q86UU9 113 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 DEFB106AQ8N104 65 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 ZNF276Q8N554 614 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 DQX1Q8TE96 717 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 CTNNBL1Q8WYA6 563 aaPredicted RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 RFFLQ8WZ73 363 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 EDEM1Q92611 657 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MRPS31Q92665 395 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 NECTIN4Q96NY8 510 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MYADMQ96S97 322 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 SELENOOQ9BVL4 669 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 ATXN3LQ9H3M9 355 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 SMOC2Q9H3U7 446 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 ALG2Q9H553 416 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 OSGEPQ9NPF4 335 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 ABCC13Q9NSE7 274 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 TRPM5Q9NZQ8 1165 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MYO1AQ9UBC5 1043 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 NUDT5Q9UKK9 219 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 INTUQ9ULD6 942 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 PYCARDQ9ULZ3 195 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 COG5Q9UP83 839 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 NAALADL1Q9UQQ1 740 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 MRPS23Q9Y3D9 190 aaKnown RBP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 SCINQ9Y6U3 715 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 BRWD1Q9NSI6 2320 aa7.35□□□□□ -1.23
CTDSPL2-210ENST00000560834 KIAA1549LQ6ZVL6 1849 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SIGLEC16A6NMB1 481 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ZNF197O14709 1029 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 PJA2O43164 708 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 IRAK2O43187 625 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 CCP110O43303 1012 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 MSI1O43347 362 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 MTA2O94776 668 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 TBX18O95935 607 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ABL1P00519 1130 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 RALAP11233 206 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 KRT3P12035 628 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 NCAM1P13591 858 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 PFKLP17858 780 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 RFC1P35251 1148 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SOX11P35716 441 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ARHGAP25P42331 645 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 MATKP42679 507 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 PTPN9P43378 593 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 YWHAZP63104 245 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 GPC5P78333 572 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SLC7A9P82251 487 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ZXDBP98169 803 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 TFF2Q03403 129 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 KCNC4Q03721 635 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 USP4Q13107 963 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 TCEAL1Q15170 157 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 NR6A1Q15406 480 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SPA17Q15506 151 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SMAD2Q15796 467 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 C15orf59Q2T9L4 293 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 PUS10Q3MIT2 529 aaKnown RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ARHGAP15Q53QZ3 475 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 RAB6CQ53S08 254 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ATAT1Q5SQI0 421 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 HECTD3Q5T447 861 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 SYPL2Q5VXT5 272 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 BTBD8Q5XKL5 378 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 KLHDC10Q6PID8 442 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ARL14EPQ8N8R7 260 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 MAB21L3Q8N8X9 362 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 ZNF564Q8TBZ8 553 aaPredicted RBP7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 RXFP2Q8WXD0 754 aa7.34□□□□□ -1.23
CTDSPL2-210ENST00000560834 GOLGA1Q92805 767 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms