RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ZNF528Q3MIS6 628 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 FAM47CQ5HY64 1035 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 OTUD1Q5VV17 481 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PEAR1Q5VY43 1037 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TWF2Q6IBS0 349 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZNF365Q70YC5 407 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 SETD3Q86TU7 594 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PHTF2Q8N3S3 785 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZMIZ2Q8NF64 920 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TTC17Q96AE7 1141 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 MS4A14Q96JA4 679 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZBTB45Q96K62 511 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZFRQ96KR1 1074 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 RNPC3Q96LT9 517 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TACO1Q9BSH4 297 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 LSM14BQ9BX40 385 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 MTMR12Q9C0I1 747 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 DEF6Q9H4E7 631 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 MRPL17Q9NRX2 175 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 IGSF9Q9P2J2 1179 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TUBGCP4Q9UGJ1 667 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TBC1D30Q9Y2I9 924 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PES1O00541 588 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 SLC9A3R1O14745 358 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PSMD3O43242 534 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 FGF18O76093 207 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 HEXIM1O94992 359 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ITGB1P05556 798 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 GHRP10912 638 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 MDH1P40925 334 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TNFRSF4P43489 277 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 YBEYP58557 167 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 KLF1Q13351 362 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 CCDC181Q5TID7 509 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 NAA35Q5VZE5 725 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 OVOS1Q6IE37 1185 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 BZW1Q7L1Q6 419 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZNF571Q7Z3V5 609 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 NOP9Q86U38 636 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 GJD3Q8N144 294 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 CACTIN-AS1Q8N1I8 211 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 UMODL1-AS1Q8N2C9 162 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 METTL13Q8N6R0 699 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 BCL7CQ8WUZ0 217 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 NKD2Q969F2 451 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 LENG1Q96BZ8 264 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZNF707Q96C28 371 aaPredicted RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 BICD1Q96G01 975 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 EEF2KMTQ96G04 330 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 RANBP9Q96S59 729 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 ZSWIM1Q9BR11 485 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TXLNGYQ9BZA5 131 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 CDC42EP4Q9H3Q1 356 aaKnown RBP5.66□□□□□ -1.5
ZEB1-219ENST00000560721 MMRN2Q9H8L6 949 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 EPB41L5Q9HCM4 733 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 TBC1D14Q9P2M4 693 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 NOD1Q9Y239 953 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 CEP83Q9Y592 693 aa5.66□□□□□ -1.5
ZEB1-219ENST00000560721 PLXNB3Q9ULL4 1909 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 TMEM150BA6NC51 233 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 KLHL33A6NCF5 533 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 ZSCAN5CA6NGD5 496 aaPredicted RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 CCDC188H7C350 402 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 XYLBO75191 536 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 RASSF9O75901 435 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 ITGB3P05106 788 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 SRPRAP08240 638 aaKnown RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 RPS9P46781 194 aaKnown RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 IFI35P80217 286 aaPredicted RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 SLC25A11Q02978 314 aaKnown RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 PDCLQ13371 301 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 ZBTB41Q5SVQ8 909 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 KSR1Q8IVT5 923 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 UNC45BQ8IWX7 931 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 TTC13Q8NBP0 860 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 ATXN2LQ8WWM7 1075 aaKnown RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 CPB2Q96IY4 423 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 SERPINB11Q96P15 392 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 OLFM3Q96PB7 478 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 NAP1L3Q99457 506 aaPredicted RBP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.65□□□□□ -1.5
ZEB1-219ENST00000560721 TMEM248Q9NWD8 314 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 SMARCAL1Q9NZC9 954 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 NFU1Q9UMS0 254 aa5.65□□□□□ -1.5
ZEB1-219ENST00000560721 A0A087X0T9 212 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 KRIT1O00522 736 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 SLC7A4O43246 635 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 RAD51CO43502 376 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 MOSPD3O75425 235 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 ASLP04424 464 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 KRT7P08729 469 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 FAM228BP0C875 321 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 FAM200BP0CF97 657 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 NR1D1P20393 614 aa5.65□□□□□ -1.51
ZEB1-219ENST00000560721 MARK3P27448 753 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms