RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 NOD1Q9Y239 953 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CACNA1BQ00975 2339 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 A0A0G2JND7 137 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 DYTNA2CJ06 578 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 RRN3P2A6NIE6 340 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 SFI1A8K8P3 1242 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 TRDMT1O14717 391 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 AP1G1O43747 822 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 KRT38O76015 456 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CBX6O95503 412 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 LDHAP00338 332 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 F2P00734 622 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CYP1A1P04798 512 aaPredicted RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 WEE2P0C1S8 567 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 ZNF286BP0CG31 522 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CYP2C9P11712 490 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 KRT5P13647 590 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CSF2RAP15509 400 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 STIP1P31948 543 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 RPA3P35244 121 aaPredicted RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 PSEN2P49810 448 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 SERPINB8P50452 374 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 SESN3P58005 492 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CDC42EP1Q00587 391 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 GPS1Q13098 491 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 PPIGQ13427 754 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 TRPC3Q13507 836 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 MFSD10Q14728 455 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 ACAP1Q15027 740 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CTC1Q2NKJ3 1217 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 TFDP3Q5H9I0 405 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 C9orf50Q5SZB4 431 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 ZFYVE27Q5T4F4 411 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 RNASEH2BQ5TBB1 312 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 LRRC6Q86X45 466 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CROCCP3Q8IVE0 287 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 MAP4K3Q8IVH8 894 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 ARHGEF19Q8IW93 802 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 RBM12BQ8IXT5 1001 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 BANPQ8N9N5 519 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 TMEM161BQ8NDZ6 487 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 ATP2A3Q93084 1043 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 AZIN2Q96A70 460 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 DGCR14Q96DF8 476 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CMTM5Q96DZ9 223 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 HIC2Q96JB3 615 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 C9orf72Q96LT7 481 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 CATSPER2Q96P56 530 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 PCDHB18PQ96TA0 734 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 GCOM2Q9BZD3 368 aaPredicted RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 IMPG2Q9BZV3 1241 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 POLR3FQ9H1D9 316 aaPredicted RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 C2orf40Q9H1Z8 148 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 MLXIPLQ9NP71 852 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 MRPL40Q9NQ50 206 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 SOX13Q9UN79 622 aa8.87□□□□□ -0.99
CCDC33-209ENST00000560565 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.87□□□□□ -0.99
CCDC33-209ENST00000560565 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 EME2A4GXA9 379 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 TMEM150BA6NC51 233 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 TTC36A6NLP5 189 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 E7ESA3 106 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 H3BRB1 525 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 COPEO14579 308 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 TP73O15350 636 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SLC16A4O15374 487 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PIGRP01833 764 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 KRT1P04264 644 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SERPINA6P08185 405 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 DHRS4L1P0CG22 281 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 CCDC130P13994 396 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 ANPEPP15144 967 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PRDX6P30041 224 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 MAGEA8P43361 318 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 HK2P52789 917 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 CCL23P55773 120 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 ZNF200P98182 395 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SLC18A2Q05940 514 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PPP3CAQ08209 521 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 WASHC5Q12768 1159 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PDIA2Q13087 525 aaKnown RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 LSAMPQ13449 338 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 CYLC2Q14093 348 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 TFDP1Q14186 410 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PRKD1Q15139 912 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 CCDC142Q17RM4 750 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 ZC2HC1CQ53FD0 456 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 ACSBG2Q5FVE4 666 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 FSCBQ5H9T9 825 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 EFHC1Q5JVL4 640 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 TTC39BQ5VTQ0 682 aaPredicted RBP8.86□□□□□ -0.99
CCDC33-209ENST00000560565 C1orf146Q5VVC0 180 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SLFN12LQ6IEE8 588 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 PLEKHA7Q6IQ23 1121 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 ZFP1Q6P2D0 407 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SLC47A2Q86VL8 602 aa8.86□□□□□ -0.99
CCDC33-209ENST00000560565 SPATA24Q86W54 205 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms