RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PRUNE1Q86TP1 453 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 RASAL3Q86YV0 1011 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 SUGP1Q8IWZ8 645 aaKnown RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 SCML4Q8N228 414 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 C7orf31Q8N865 590 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 ANKRD42Q8N9B4 389 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 B3GALNT2Q8NCR0 500 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 SLC44A1Q8WWI5 657 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 NTAN1Q96AB6 310 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 SLC2A13Q96QE2 648 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 PAFAH2Q99487 392 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 ELAC2Q9BQ52 826 aaKnown RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 NAT9Q9BTE0 207 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 BRD8Q9H0E9 1235 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 UPF3AQ9H1J1 476 aaKnown RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 VPS11Q9H270 941 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 FAM49BQ9NUQ9 324 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 ETNK2Q9NVF9 386 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 MKS1Q9NXB0 559 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 KLHL14Q9P2G3 628 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 SAE1Q9UBE0 346 aaPredicted RBP10.07□□□□□ -0.8
RTF1-206ENST00000560447 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 TBK1Q9UHD2 729 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 SLC12A4Q9UP95 1085 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 AP4E1Q9UPM8 1137 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 GIT1Q9Y2X7 761 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 IKBKGQ9Y6K9 419 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 PATJQ8NI35 1801 aa10.07□□□□□ -0.8
RTF1-206ENST00000560447 H3BRJ5 948 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 KCNN4O15554 427 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 ATP5HO75947 161 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FGFR1P11362 822 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 CREB1P16220 341 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 PTPN1P18031 435 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 CA4P22748 312 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 PRKCHP24723 683 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 CNTFP26441 200 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SCTRP47872 440 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 HCAR3P49019 387 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SERPINB9P50453 376 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 HUNKP57058 714 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 WDR4P57081 412 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 YWHAZP63104 245 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 MRPS5P82675 430 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 ZNF200P98182 395 aaPredicted RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 SLC18A2Q05940 514 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 TMEM62Q0P6H9 643 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SCAPQ12770 1279 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 DNAJC3Q13217 504 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SEMA5AQ13591 1074 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 DBN1Q16643 649 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 INTS6LQ5JSJ4 861 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 HHATQ5VTY9 493 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 ZNF449Q6P9G9 518 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FAM43BQ6ZT52 329 aaPredicted RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 BEND5Q7L4P6 421 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 ZC3H18Q86VM9 953 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 CHSY1Q86X52 802 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SCUBE3Q8IX30 993 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 VPS52Q8N1B4 723 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 LRRC8CQ8TDW0 803 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FBF1Q8TES7 1133 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 MZB1Q8WU39 189 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 DCAKDQ8WVC6 231 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 MTBPQ96DY7 904 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 PGAP3Q96FM1 320 aaPredicted RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 PIWIL1Q96J94 861 aaKnown RBP10.06□□□□□ -0.8
RTF1-206ENST00000560447 NPY6RQ99463 290 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 PITPNM3Q9BZ71 974 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 DPEP3Q9H4B8 488 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 CNGB3Q9NQW8 809 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 RAB6BQ9NRW1 208 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FGFR1OP2Q9NVK5 253 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FLRT1Q9NZU1 646 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 CPA4Q9UI42 421 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 GINS2Q9Y248 185 aa10.06□□□□□ -0.8
RTF1-206ENST00000560447 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
RTF1-206ENST00000560447 CYB561D2O14569 222 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 GPR182O15218 404 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SPTLC1O15269 473 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 NCAM2O15394 837 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 MTSS1O43312 755 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 OPHN1O60890 802 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 ZNF623O75123 536 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 RASSF9O75901 435 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms