RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 NME3Q13232 169 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 VEPH1Q14D04 833 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 TAZQ16635 292 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SMTNL2Q2TAL5 461 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 KCNT1Q5JUK3 1230 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ERMARDQ5T6L9 678 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SEL1L2Q5TEA6 688 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CCDC181Q5TID7 509 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SNX30Q5VWJ9 437 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PPP2R2DQ66LE6 453 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 MSANTD2Q6P1R3 559 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 MFSD7Q6UXD7 560 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ANKS1BQ7Z6G8 1248 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 DNAJB7Q7Z6W7 309 aaPredicted RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 TAC4Q86UU9 113 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 FAM131BQ86XD5 332 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 TDHQ8IZJ6 230 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 LRRN4CLQ8ND94 238 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SLC7A14Q8TBB6 771 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 RNF139Q8WU17 664 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SLC22A17Q8WUG5 538 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 TEKT4Q8WW24 435 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 OVCA2Q8WZ82 227 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 CASP10Q92851 521 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 TRMT2BQ96GJ1 504 aaKnown RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 RBM41Q96IZ5 413 aaKnown RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SLITRK1Q96PX8 696 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 HERPUD2Q9BSE4 406 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PRO3102Q9H379 93 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 SMOC2Q9H3U7 446 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 WDR6Q9NNW5 1121 aaKnown RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 PIGVQ9NUD9 493 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 DDIT4Q9NX09 232 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 NUDT5Q9UKK9 219 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 MAGED2Q9UNF1 606 aaPredicted RBP7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ASB3Q9Y575 518 aa7.54□□□□□ -1.2
HMBOX1-214ENST00000560357 ATG2AQ2TAZ0 1938 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ANAPC1Q9H1A4 1944 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SYNJ2BP-COX16A0A087WUM0 186 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 TCRBV7S2A1N4TA0A589 114 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 LRRD1A4D1F6 860 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CTAGE15A4D2H0 777 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ZNF840PA6NDX5 716 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 EPOPA6NHQ4 379 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 PGRMC1O00264 195 aaKnown RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 MDM4O15151 490 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 IRAK2O43187 625 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 TADA3O75528 432 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 TBX18O95935 607 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 FGGP02679 453 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 F11P03951 625 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 C8AP07357 584 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CTAGE8P0CG41 777 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 RALAP11233 206 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 KDELR1P24390 212 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 GBP1P32455 592 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ADRA1BP35368 520 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CDKN2BP42772 138 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CXCR3P49682 368 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 COPS2P61201 443 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SMAD3P84022 425 aaKnown RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ITIH3Q06033 890 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 PLD1Q13393 1074 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 LLGL1Q15334 1064 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CLUL1Q15846 466 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CA9Q16790 459 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 LONRF2Q1L5Z9 754 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ZC3H12AQ5D1E8 599 aaKnown RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SPOCD1Q6ZMY3 1216 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CTAGE6Q86UF2 777 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ITIH5Q86UX2 942 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SLC13A5Q86YT5 568 aaPredicted RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 PSTKQ8IV42 348 aaKnown RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CTAGE4Q8IX94 777 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 CCDC185Q8N715 623 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 PDZD8Q8NEN9 1154 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SPATA4Q8NEY3 305 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 FAM71BQ8TC56 605 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 ARNTL2Q8WYA1 636 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 HSPH1Q92598 858 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 NTAN1Q96AB6 310 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 RPGRIP1Q96KN7 1286 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SNRNP25Q9BV90 132 aaKnown RBP7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 MAGEB5Q9BZ81 275 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 OSBPL8Q9BZF1 889 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 LMAN2LQ9H0V9 348 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 PLEKHA4Q9H4M7 779 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 FAM204AQ9H8W3 233 aa7.53□□□□□ -1.2
HMBOX1-214ENST00000560357 SLC28A3Q9HAS3 691 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms