RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 FNIP1Q8TF40 1166 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 RXFP2Q8WXD0 754 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 PGAP3Q96FM1 320 aaPredicted RBP12.79□□□□□ -0.36
USP8-209ENST00000560297 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 NCAPGQ9BPX3 1015 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 CNPY3Q9BT09 278 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 PACSIN1Q9BY11 444 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 DCLK3Q9C098 648 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 GKN1Q9NS71 199 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
USP8-209ENST00000560297 SMPD4Q9NXE4 827 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 CTTNBP2NLQ9P2B4 639 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 LIMD1Q9UGP4 676 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 SFMBT1Q9UHJ3 866 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 TLR6Q9Y2C9 796 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 PAXBP1Q9Y5B6 917 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 GREB1Q4ZG55 1949 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
USP8-209ENST00000560297 E2F8A0AVK6 867 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 M0QYT0 321 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 MYO1FO00160 1098 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 LEFTY2O00292 366 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 MDM4O15151 490 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 ENDOD1O94919 500 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 IGLV3-25P01717 112 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 GPD1P21695 349 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 VIPR2P41587 438 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 TBX4P57082 545 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 RPL7AP62424 266 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 CCZ1BP86790 482 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 ZP2Q05996 745 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 EIF4EBP2Q13542 120 aaPredicted RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 HTR4Q13639 388 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 ACAP1Q15027 740 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 TCEAL1Q15170 157 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 PARM1Q6UWI2 310 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 HTR3DQ70Z44 454 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP8-209ENST00000560297 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 EMC1Q8N766 993 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 JOSD2Q8TAC2 188 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 SLC35G2Q8TBE7 412 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 PLD4Q96BZ4 506 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 CALR3Q96L12 384 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 CFAP57Q96MR6 1250 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP8-209ENST00000560297 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 TBC1D14Q9P2M4 693 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 LSM7Q9UK45 103 aaKnown RBP12.78□□□□□ -0.36
USP8-209ENST00000560297 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 ZNF510Q9Y2H8 683 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 SH3BP1Q9Y3L3 701 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 DOCK6Q96HP0 2047 aa12.78□□□□□ -0.36
USP8-209ENST00000560297 A0A0A6YYK5 440 aaPredicted RBP12.77□□□□□ -0.37
USP8-209ENST00000560297 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 SLC9A3R1O14745 358 aaPredicted RBP12.77□□□□□ -0.37
USP8-209ENST00000560297 IRAK2O43187 625 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 STC2O76061 302 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 GJB6O95452 261 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 PRAMEF12O95522 483 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 PSMC3P17980 439 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 FCARP24071 287 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 CCR1P32246 355 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 SULT1E1P49888 294 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 VAV2P52735 878 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 ZXDBP98169 803 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 DEUP1Q05D60 604 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 NME3Q13232 169 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 PIGHQ14442 188 aaPredicted RBP12.77□□□□□ -0.37
USP8-209ENST00000560297 NUGGCQ68CJ6 796 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 STRADAQ7RTN6 431 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 KIAA1328Q86T90 577 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 TAC4Q86UU9 113 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP8-209ENST00000560297 YAF2Q8IY57 180 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 CENPIQ92674 756 aaPredicted RBP12.77□□□□□ -0.37
USP8-209ENST00000560297 FGF14Q92915 247 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 RNF34Q969K3 372 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 AZIN2Q96A70 460 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 ARHGEF26Q96DR7 871 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 TBCBQ99426 244 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 KCNK12Q9HB15 430 aa12.77□□□□□ -0.37
USP8-209ENST00000560297 CFAP97Q9P2B7 532 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms