RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 AGO1Q9UL18 857 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 HCN2Q9UL51 889 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 SLC8A2Q9UPR5 921 aa12.19□□□□□ -0.46
RABGGTA-216ENST00000560243 SPAG17Q6Q759 2223 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 A0A0A0MRY4 1105 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 CACNG3O60359 315 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 APODP05090 189 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 FYNP06241 537 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TYRP14679 529 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 EEF1GP26641 437 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TIE1P35590 1138 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 GRIA2P42262 883 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 KIR2DL1P43626 348 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 RPL34P49207 117 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 CCDC183Q5T5S1 534 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 SASS6Q6UVJ0 657 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TOGARAM2Q6ZUX3 1019 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 SYT13Q7L8C5 426 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 LONP2Q86WA8 852 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 PASD1Q8IV76 773 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 RNF139Q8WU17 664 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 IRGQQ8WZA9 623 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 HSFY1Q96LI6 401 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 VPS16Q9H269 839 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 ABCC13Q9NSE7 274 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 DNAJC17Q9NVM6 304 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 MARK1Q9P0L2 795 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TMEM63CQ9P1W3 806 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 DEC1Q9P2X7 70 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 STRIP2Q9ULQ0 834 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 FHOD1Q9Y613 1164 aa12.18□□□□□ -0.46
RABGGTA-216ENST00000560243 TBC1D3BA6NDS4 549 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 E5RJQ4 531 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 SGK1O00141 431 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 MED7O43513 233 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 KLF8O95600 359 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 MBD3O95983 291 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 LTFP02788 710 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 CLCN1P35523 988 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 KLK7P49862 253 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 DRAP1Q14919 205 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 KRT31Q15323 416 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 STX1AQ16623 288 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 MSANTD2Q6P1R3 559 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 WDR5BQ86VZ2 330 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 FAM71AQ8IYT1 594 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 TERB1Q8NA31 727 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 IL17RCQ8NAC3 791 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 TXNDC5Q8NBS9 432 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 PIWIL1Q96J94 861 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 FAM81BQ96LP2 452 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 LSM14BQ9BX40 385 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 DCLK3Q9C098 648 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 OLA1Q9NTK5 396 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 ANO10Q9NW15 660 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 WDR35Q9P2L0 1181 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
RABGGTA-216ENST00000560243 FAM170AA1A519 330 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 ADAM23O75077 832 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 FBXO21O94952 628 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PENKP01210 267 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 MRPS21P82921 87 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PDCLQ13371 301 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 RAPGEF1Q13905 1077 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 SIM2Q14190 667 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 NCAPHQ15003 741 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 TAF5Q15542 800 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 MEA1Q16626 185 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 C10orf76Q5T2E6 689 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 KLHDC7AQ5VTJ3 777 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 FYB2Q5VWT5 728 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 SYPL2Q5VXT5 272 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PRR23BQ6ZRT6 265 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 STK32AQ8WU08 396 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 RUBCNQ92622 972 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 ACDQ96AP0 544 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PLD4Q96BZ4 506 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 CPXM1Q96SM3 734 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 HINFPQ9BQA5 517 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 HSD3B7Q9H2F3 369 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 PLCB1Q9NQ66 1216 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 CLEC4EQ9ULY5 219 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-216ENST00000560243 ABCA7Q8IZY2 2146 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms