RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 DUS2Q9NX74 493 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 RASAL2Q9UJF2 1139 aa12.58□□□□□ -0.4
RABGGTA-215ENST00000560207 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 PIK3R2O00459 728 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 DDX3XO00571 662 aaKnown RBP eCLIP12.57□□□□□ -0.47e-14■■□□□ 12.1
RABGGTA-215ENST00000560207 IRAK2O43187 625 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ADH1CP00326 375 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 APOEP02649 317 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 SKILP12757 684 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 GDI1P31150 447 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC11A2P49281 568 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ZXDAP98168 799 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ACAP1Q15027 740 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 E2F5Q15329 346 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ITPRIPL2Q3MIP1 535 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC25A52Q3SY17 297 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 DNAJC24Q6P3W2 148 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 WDR59Q6PJI9 974 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 MIB1Q86YT6 1006 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 TC2NQ8N9U0 490 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 EDEM1Q92611 657 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 CALR3Q96L12 384 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 FAM83CQ9BQN1 747 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 CFAP97Q9P2B7 532 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 ARHGAP20Q9P2F6 1191 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 TMEM59LQ9UK28 342 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 INTUQ9ULD6 942 aa12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 MRPS17Q9Y2R5 130 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-215ENST00000560207 UNC80Q8N2C7 3258 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 STC2O76061 302 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 TRUB2O95900 331 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 TBX18O95935 607 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 IGLV3-25P01717 112 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 IGLV3-27P01718 113 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 FYNP06241 537 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 ASGR2P07307 311 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 SDC4P31431 198 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CCR1P32246 355 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 EIF4A3P38919 411 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 PTPN9P43378 593 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 TBX4P57082 545 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 GPC5P78333 572 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 PTP4A2Q12974 167 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 RUNX3Q13761 415 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 BRMS1LQ5PSV4 323 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 E4F1Q66K89 784 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 PLEKHA7Q6IQ23 1121 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 STRADAQ7RTN6 431 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 RALGPS2Q86X27 583 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 SUGP1Q8IWZ8 645 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CPXM2Q8N436 756 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 ATP6V0D2Q8N8Y2 350 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 DQX1Q8TE96 717 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CLEC4CQ8WTT0 213 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CTNNBL1Q8WYA6 563 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 NPY6RQ99463 290 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 NHEJ1Q9H9Q4 299 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 GKN1Q9NS71 199 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 STOML2Q9UJZ1 356 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 FBXL21Q9UKT6 434 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 NAALADL1Q9UQQ1 740 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 CCL26Q9Y258 94 aa12.56□□□□□ -0.4
RABGGTA-215ENST00000560207 TTC28Q96AY4 2481 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 A0A087X0T9 212 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 GOLGA8SH3BPF8 625 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 NRG2O14511 850 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 NCAM2O15394 837 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ENDOD1O94919 500 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 CYBBP04839 570 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 FAM228BP0C875 321 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 PDGFRAP16234 1089 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ABCB4P21439 1286 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 FECHP22830 423 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 EIF2DP41214 584 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 PGFP49763 221 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 AIF1P55008 147 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 SPA17Q15506 151 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ARL13BQ3SXY8 428 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 ADGRF1Q5T601 910 aa12.55□□□□□ -0.4
RABGGTA-215ENST00000560207 POTEHQ6S545 545 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms