RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SNRPAP09012 282 aaKnown RBP10.4□□□□□ -0.74
LRRC28-216ENST00000559819 GOT1P17174 413 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 CDC25CP30307 473 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 CRADDP78560 199 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 C9orf57Q5W0N0 161 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 DENND5BQ6ZUT9 1274 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 NT5DC4Q86YG4 428 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 OR6J1Q8NGC5 347 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 KBTBD7Q8WVZ9 684 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 USP6NLQ92738 828 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 SIGLEC10Q96LC7 697 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 CSPG4P5Q96PW8 444 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 C11orf84Q9BUA3 381 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-216ENST00000559819 IQCGQ9H095 443 aaKnown RBP10.4□□□□□ -0.74
LRRC28-216ENST00000559819 COX16Q9P0S2 106 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 LOC102724159A0A0B4J2E5 919 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 RBM47A0AV96 593 aaKnown RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 HMX2A2RU54 273 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 WFS1O76024 890 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 RECQL4O94761 1208 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 DLDP09622 509 aaKnown RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 SETSIPP0DME0 302 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 MYL2P10916 166 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 PRKCHP24723 683 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 PTPN4P29074 926 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 CLNS1AP54105 237 aaKnown RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 PWP2Q15269 919 aaKnown RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 ZBTB6Q15916 424 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 DCAF4L1Q3SXM0 396 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 MROH9Q5TGP6 573 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 NCBP2-AS2Q69YL0 99 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 ALYREFQ86V81 257 aaKnown RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 FAM131BQ86XD5 332 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 VPS52Q8N1B4 723 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 TTC39CQ8N584 583 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 BEST2Q8NFU1 509 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF398Q8TD17 642 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 SLC2A14Q8TDB8 520 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 LBHD1Q9BQE6 289 aaPredicted RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 DENND2DQ9H6A0 471 aaPredicted RBP10.4□□□□□ -0.75
LRRC28-216ENST00000559819 ARMCX1Q9P291 453 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 CITO14578 2027 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 KAT6AQ92794 2004 aa10.4□□□□□ -0.75
LRRC28-216ENST00000559819 ENTPD5O75356 428 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 KRT37O76014 449 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 TKTP29401 623 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 MAGEA6P43360 314 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 RABGGTBP53611 331 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 IRX4P78413 519 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 CDK16Q00536 496 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 ZBTB16Q05516 673 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 SNAPC2Q13487 334 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 ARHGAP17Q68EM7 881 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 SLC27A1Q6PCB7 646 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF410Q86VK4 478 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 SKA1Q96BD8 255 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 PTCD3Q96EY7 689 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 QKIQ96PU8 341 aaKnown RBP eCLIP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 LGMNQ99538 433 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 CADM1Q9BY67 442 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 DTLQ9NZJ0 730 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 PLLPQ9Y342 182 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 WDR27A2RRH5 827 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 PDHXO00330 501 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 GPR32O75388 356 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 KITP10721 976 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 MAGEA3P43357 314 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 BST1Q10588 318 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 BST2Q10589 180 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 HIC1Q14526 733 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 MDH1BQ5I0G3 518 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 RINLQ6ZS11 566 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 LENG1Q96BZ8 264 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 PGLYRP2Q96PD5 576 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 EBNA1BP2Q99848 306 aaKnown RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
LRRC28-216ENST00000559819 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-216ENST00000559819 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 MFSD11O43934 449 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 GCATO75600 419 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 KCNA4P22459 653 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 IGFBP6P24592 240 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 GNL1P36915 607 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 PTPN9P43378 593 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 CPA2P48052 419 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 CHI3L2Q15782 390 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 HSF5Q4G112 596 aaPredicted RBP10.38□□□□□ -0.75
LRRC28-216ENST00000559819 ANKRD20A2Q5SQ80 823 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 ANKRD20A1Q5TYW2 823 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 ANKRD20A3Q5VUR7 823 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 ZCCHC23Q6ZST2 131 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
LRRC28-216ENST00000559819 DEFB106AQ8N104 65 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms