RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 F5P12259 2224 aa11.95□□□□□ -0.5
SNX1-204ENST00000559061 SLC12A8A0AV02 714 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 IRAK2O43187 625 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 PI15O43692 258 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 HSF2BPO75031 334 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 NCAM1P13591 858 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 GLULP15104 373 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 CD72P21854 359 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 CTHP32929 405 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 SCNN1AP37088 669 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 ADKP55263 362 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 STARD6P59095 220 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 YWHAZP63104 245 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 RUNX3Q13761 415 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 NADSYN1Q6IA69 706 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 RHBDF2Q6PJF5 856 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 ERICH1Q86X53 443 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 SFTPA1Q8IWL2 248 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 ADGRG2Q8IZP9 1017 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 TC2NQ8N9U0 490 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 IRF7Q92985 503 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 NT5C3BQ969T7 300 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 NPY6RQ99463 290 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 FOXQ1Q9C009 403 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 TRIM5Q9C035 493 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 ECT2Q9H8V3 914 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 POPDC2Q9HBU9 364 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 FBRSL1Q9HCM7 1045 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 AGO1Q9UL18 857 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 LUC7L2Q9Y383 392 aaKnown RBP11.94□□□□□ -0.5
SNX1-204ENST00000559061 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
SNX1-204ENST00000559061 A0A087X0T9 212 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 SART1O43290 800 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 ATMINO43313 823 aaPredicted RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 GPR37L1O60883 481 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 GLI1P08151 1106 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 FAM228BP0C875 321 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 TARSP26639 723 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 GJA4P35212 333 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 OPRD1P41143 372 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 SGSHP51688 502 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 OGDHQ02218 1023 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 DHCR24Q15392 516 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 FAM133BQ5BKY9 247 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 ACAD10Q6JQN1 1059 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 TPRG1Q6ZUI0 275 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 RSRC2Q7L4I2 434 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 BMP8AQ7Z5Y6 402 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 DDX42Q86XP3 938 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX1-204ENST00000559061 TMEM25Q86YD3 366 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 MCOLN2Q8IZK6 566 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 PHTF2Q8N3S3 785 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 EMC1Q8N766 993 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 NOX5Q96PH1 765 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 CDK5RAP1Q96SZ6 601 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 CHP1Q99653 195 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 NACA2Q9H009 215 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 PDCL3Q9H2J4 239 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 TBC1D17Q9HA65 648 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 ABHD10Q9NUJ1 306 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 DLGAP2Q9P1A6 1054 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 STOML2Q9UJZ1 356 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 HBS1LQ9Y450 684 aaKnown RBP11.93□□□□□ -0.5
SNX1-204ENST00000559061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX1-204ENST00000559061 PIAS3Q9Y6X2 628 aa11.93□□□□□ -0.5
SNX1-204ENST00000559061 MUC22E2RYF6 1773 aaPredicted RBP11.92□□□□□ -0.5
SNX1-204ENST00000559061 C2CD4BA6NLJ0 364 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TMCO5BA8MYB1 307 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 SPECC1L-ADORA2AF8WAN1 911 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TRUB2O95900 331 aaKnown RBP11.92□□□□□ -0.5
SNX1-204ENST00000559061 SERPING1P05155 500 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 RRM1P23921 792 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 SLC6A4P31645 630 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 MATKP42679 507 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 PFKPQ01813 784 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ZNF252P-AS1Q0IIN9 211 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 NNTQ13423 1086 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 TRIM14Q14142 442 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 DCAF6Q58WW2 860 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
SNX1-204ENST00000559061 LY6G5CQ5SRR4 150 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms