RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 OPA1O60313 960 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 GFPT2O94808 682 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 ASS1P00966 412 aaKnown RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 PRKCIP41743 596 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 STAT1P42224 750 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 MAGEA9P43362 315 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 RPS9P46781 194 aaKnown RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 MFAP3P55082 362 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 GFPT1Q06210 699 aaPredicted RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 SGSM1Q2NKQ1 1148 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 TUBB8Q3ZCM7 444 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 SPOPLQ6IQ16 392 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 GJB7Q6PEY0 223 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 DENND5BQ6ZUT9 1274 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.82□□□□□ -0.68
TPM1-212ENST00000558347 SPAG5Q96R06 1193 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 CYP2S1Q96SQ9 504 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 B3GNT5Q9BYG0 378 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 ZNF518BQ9C0D4 1074 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 FAM204AQ9H8W3 233 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 UBE2TQ9NPD8 197 aaPredicted RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
TPM1-212ENST00000558347 FANCMQ8IYD8 2048 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 GOLGA6BA6NDN3 693 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 SOBPA7XYQ1 873 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 F8VZ95 297 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 SPECC1L-ADORA2AF8WAN1 911 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 TRIM66O15016 1216 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 LAMTOR5O43504 91 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 CHRNB1P11230 501 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 CTHP32929 405 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 SOX5P35711 763 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 KPNA1P52294 538 aaPredicted RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 GYS2P54840 703 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 MLLT6P55198 1093 aaPredicted RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 NOP14P78316 857 aaKnown RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 KLHL30Q0D2K2 578 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 MTAPQ13126 283 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 ORC1Q13415 861 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 DRAP1Q14919 205 aaPredicted RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 MEI1Q5TIA1 1274 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 TRIM68Q6AZZ1 485 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 C8orf74Q6P047 294 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 PAQR9Q6ZVX9 377 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 IRF2BP2Q7Z5L9 587 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 IFT20Q8IY31 132 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 NKD2Q969F2 451 aaPredicted RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 C8orf48Q96LL4 319 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 CEP295NLQ96MC4 621 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 KREMEN1Q96MU8 473 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 SH3GL2Q99962 352 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 FAM83CQ9BQN1 747 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 LRRC1Q9BTT6 524 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 TTLL2Q9BWV7 592 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 IMPG2Q9BZV3 1241 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 ELOVL4Q9GZR5 314 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 C8orf33Q9H7E9 229 aaPredicted RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 KIF9Q9HAQ2 790 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 HPS4Q9NQG7 708 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-212ENST00000558347 GKN1Q9NS71 199 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 HMGXB4Q9UGU5 601 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
TPM1-212ENST00000558347 HELZP42694 1942 aaKnown RBP10.81□□□□□ -0.68
TPM1-212ENST00000558347 OTOL1A6NHN0 477 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 SHOX2O60902 331 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 CCDC172P0C7W6 258 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 FERP16591 822 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 TBXAS1P24557 533 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 ASPAP45381 313 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 CSTF1Q05048 431 aaKnown RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 RAPGEF1Q13905 1077 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 GAS6Q14393 721 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 ZNF268Q14587 947 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 TSSK4Q6SA08 328 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 PPM1KQ8N3J5 372 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 MREGQ8N565 214 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 ARL14EPQ8N8R7 260 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 SHC3Q92529 594 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 TATDN2Q93075 761 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 CHFRQ96EP1 664 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 MSANTD3Q96H12 275 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 CHRDQ9H2X0 955 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 EBF3Q9H4W6 596 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 FAM124BQ9H5Z6 455 aaPredicted RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 APOBEC3GQ9HC16 384 aaKnown RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 GDF3Q9NR23 364 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 THG1LQ9NWX6 298 aaKnown RBP10.8□□□□□ -0.68
TPM1-212ENST00000558347 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 FBXO4Q9UKT5 387 aa10.8□□□□□ -0.68
TPM1-212ENST00000558347 A0A0A6YYK5 440 aaPredicted RBP10.79□□□□□ -0.68
TPM1-212ENST00000558347 TRAV19A0A0A6YYK7 116 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 AGPSO00116 658 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 PALMO75781 387 aa10.79□□□□□ -0.68
TPM1-212ENST00000558347 CKMP06732 381 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms