RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 POLNQ7Z5Q5 900 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 SLC26A11Q86WA9 606 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 ERO1BQ86YB8 467 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 RFX6Q8HWS3 928 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 PPP4R1Q8TF05 950 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 GFM2Q969S9 779 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 FAF2Q96CS3 445 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 FAM213AQ9BRX8 229 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 DHRS4Q9BTZ2 278 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 C20orf27Q9GZN8 174 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 HERC5Q9UII4 1024 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 ZNF180Q9UJW8 692 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 FARP1Q9Y4F1 1045 aaPredicted RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 TELO2Q9Y4R8 837 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 TRIM43BA6NCK2 446 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 AIM2O14862 343 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 KLF11O14901 512 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 HNRNPDLO14979 420 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 CFLARO15519 480 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 ZFXP17010 805 aaPredicted RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 SLC5A2P31639 672 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 EIF3EP60228 445 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 NAA20P61599 178 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 RPL10AP62906 217 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 SLC18A2Q05940 514 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 PDPK2PQ6A1A2 396 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 DRICH1Q6PGQ1 229 aaPredicted RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 NCCRP1Q6ZVX7 275 aaPredicted RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 LPCAT2Q7L5N7 544 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 UNC45BQ8IWX7 931 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 NUP93Q8N1F7 819 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 PQLC1Q8N2U9 271 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 CCDC33Q8N5R6 958 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 NAT8LQ8N9F0 302 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 FNDC8Q8TC99 324 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 AGR3Q8TD06 166 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 DDI1Q8WTU0 396 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 DEFB118Q96PH6 123 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 CALN1Q9BXU9 219 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 COPS7BQ9H9Q2 264 aaPredicted RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 CNTN3Q9P232 1028 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 RSL24D1Q9UHA3 163 aaKnown RBP5.24□□□□□ -1.57
HMG20A-204ENST00000558288 DOLKQ9UPQ8 538 aa5.24□□□□□ -1.57
HMG20A-204ENST00000558288 SF3B1O75533 1304 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 SDR42E2A6NKP2 422 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 BTBD19C9JJ37 291 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 NOP56O00567 594 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 DCXO43602 365 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 CCNT2O60583 730 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 DNAJA2O60884 412 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 SIN3BO75182 1162 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 TFPTP0C1Z6 253 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 AOC1P19801 751 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 GRK4P32298 578 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 STT3AP46977 705 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 PSMD7P51665 324 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 STAT2P52630 851 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 NR1H2P55055 460 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 MTTPP55157 894 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 NOMO3P69849 1222 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 SPDYE2Q495Y8 402 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 CEP55Q53EZ4 464 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 ZNF394Q53GI3 561 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 CCDC92Q53HC0 331 aaPredicted RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 FASTKD1Q53R41 847 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 HABP4Q5JVS0 413 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 FAXCQ5TGI0 409 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 VWA5B1Q5TIE3 1220 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 CES4AQ5XG92 561 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 C16orf46Q6P387 395 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 DARS2Q6PI48 645 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 ENOSF1Q7L5Y1 443 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 ZNF677Q86XU0 584 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 FBXW8Q8N3Y1 598 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 MARVELD2Q8N4S9 558 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 KCTD17Q8N5Z5 321 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 RNF148Q8N7C7 305 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 GIPC3Q8TF64 312 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 NKD2Q969F2 451 aaPredicted RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 MKL1Q969V6 931 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 CMTM5Q96DZ9 223 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 KCNK16Q96T55 309 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 DCUN1D5Q9BTE7 237 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 PCDH18Q9HCL0 1135 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 THAP1Q9NVV9 213 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 RRN3Q9NYV6 651 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 PCDH10Q9P2E7 1040 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 ZC3H7BQ9UGR2 993 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 PCSK1NQ9UHG2 260 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 COLQQ9Y215 455 aaPredicted RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 GNEQ9Y223 722 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 MCF2LO15068 1137 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 ITM2AO43736 263 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 UGT1A9O60656 530 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 KRT38O76015 456 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 NDUFB10O96000 172 aa5.23□□□□□ -1.57
HMG20A-204ENST00000558288 P4HBP07237 508 aaKnown RBP5.23□□□□□ -1.57
HMG20A-204ENST00000558288 SYN1P17600 705 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms