RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ULK2Q8IYT8 1036 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 EFHBQ8N7U6 833 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PI4KBQ9UBF8 816 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 POLG2Q9UHN1 485 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 USP17L5A8MUK1 530 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TNK2Q07912 1038 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF235Q14590 738 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 IQCKQ8N0W5 287 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TSPAN18Q96SJ8 248 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 REEP2Q9BRK0 252 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 MMTAG2Q9BU76 263 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 CHORDC1Q9UHD1 332 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 RUVBL2Q9Y230 463 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 HS6ST1O60243 411 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ITGA2BP08514 1039 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PRIM2P49643 509 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 MGAT5Q09328 741 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 RIPPLY1Q0D2K3 151 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF284Q2VY69 593 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 DSTYKQ6XUX3 929 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TTC7BQ86TV6 843 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ADHFE1Q8IWW8 467 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 AADATQ8N5Z0 425 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 FAM120BQ96EK7 910 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF624Q9P2J8 865 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TRIM64CA6NLI5 447 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 F8W810 466 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PDLIM1O00151 329 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TRIM38O00635 465 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 DCXO43602 365 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MSL3P1P0C860 447 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 CYP2D6P10635 497 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 HOXB6P17509 224 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 GPD1P21695 349 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ADRA1DP25100 572 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 SNRNP48Q6IEG0 339 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ZCCHC9Q8N567 271 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PIWIL2Q8TC59 973 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TCF12Q99081 682 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MAP3K14Q99558 947 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 NUDT12Q9BQG2 462 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MARCH7Q9H992 704 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 C3orf18Q9UK00 162 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TRDMT1O14717 391 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 HAT1O14929 419 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MAGEB2O15479 319 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PROSCO94903 275 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 SERPINA6P08185 405 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PHKA2P46019 1235 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 EFNA5P52803 228 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MAPK10P53779 464 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ENPEPQ07075 957 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PDK2Q15119 407 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 N4BP2L1Q5TBK1 243 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ZNF605Q86T29 641 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PQLC1Q8N2U9 271 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MED15Q96RN5 788 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 SEPHS2Q99611 448 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ANXA9O76027 345 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PRKAR1AP10644 381 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 IST1P53990 364 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ARCQ7LC44 396 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 AHI1Q8N157 1196 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ACTRT2Q8TDY3 377 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TFB1MQ8WVM0 346 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PKP3Q9Y446 797 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 MAGEC1O60732 1142 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 NOS1APO75052 506 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 PABPC1P11940 636 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 ANXA11P50995 505 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 FRG1Q14331 258 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 RFX4Q33E94 735 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 USP17L6PQ6QN14 398 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 TMEM110Q86TL2 294 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 RAB43Q86YS6 212 aa12.08□□□□□ -0.48
CSPG4P12-201ENST00000558282 LRRC20Q8TCA0 184 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms