RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 LRRC14Q15048 493 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 PKN2Q16513 984 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 KIZQ2M2Z5 673 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 SOWAHAQ2M3V2 549 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 TUSC1Q2TAM9 212 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 SLC25A52Q3SY17 297 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 BBS9Q3SYG4 887 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 FNBP1LQ5T0N5 605 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 STXBP5Q5T5C0 1151 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 UBAP2Q5T6F2 1119 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 CYB5D1Q6P9G0 228 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 CYP4V2Q6ZWL3 525 aaPredicted RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 ACOT1Q86TX2 421 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 SLC26A11Q86WA9 606 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 TTC30AQ86WT1 665 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 CHSY1Q86X52 802 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 FUKQ8N0W3 1084 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 VPS52Q8N1B4 723 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 TMEM86AQ8N2M4 240 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 CFAP61Q8NHU2 1237 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 RAB3IL1Q8TBN0 382 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 MGARPQ8TDB4 240 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 ZNF668Q96K58 619 aaPredicted RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 PEBP4Q96S96 227 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 PAFAH2Q99487 392 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 MRPL45Q9BRJ2 306 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 NRDE2Q9H7Z3 1164 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 NGRNQ9NPE2 291 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 EIF2B3Q9NR50 452 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 CHST12Q9NRB3 414 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 SETD4Q9NVD3 440 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 CTNNAL1Q9UBT7 734 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 STAP1Q9ULZ2 295 aa8.63□□□□□ -1.03
SPG11-209ENST00000558253 RPL26L1Q9UNX3 145 aaKnown RBP8.63□□□□□ -1.03
SPG11-209ENST00000558253 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 ARHGEF37A1IGU5 675 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 H3BRJ5 948 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 M0QZ92 97 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 NCAM2O15394 837 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 KCNN4O15554 427 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 MTSS1O43312 755 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 EDF1O60869 148 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 OPHN1O60890 802 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 KRT38O76015 456 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 RECQL4O94761 1208 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 F9P00740 461 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SNRPAP09012 282 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 CCNB1P14635 433 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 KRT4P19013 534 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 HOXC8P31273 242 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 L1CAMP32004 1257 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 NOS2P35228 1153 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 MAP2K2P36507 400 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 LHX1P48742 406 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 HCAR3P49019 387 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 GDF10P55107 478 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 WDR4P57081 412 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 INHBEP58166 350 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SLC18A2Q05940 514 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SNX17Q15036 470 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 PDK1Q15118 436 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 ANKRD22Q5VYY1 191 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SCYL2Q6P3W7 929 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 FAM43BQ6ZT52 329 aaPredicted RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 LRRC6Q86X45 466 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 PQLC3Q8N755 202 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 BANPQ8N9N5 519 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 PCDH19Q8TAB3 1148 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 DCAKDQ8WVC6 231 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 KAT2BQ92831 832 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 ACSF2Q96CM8 615 aaPredicted RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 ZMAT2Q96NC0 199 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 QKIQ96PU8 341 aaKnown RBP eCLIP8.62□□□□□ -1.03
SPG11-209ENST00000558253 SNRNP25Q9BV90 132 aaKnown RBP8.62□□□□□ -1.03
SPG11-209ENST00000558253 DUSP16Q9BY84 665 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 SAR1AQ9NR31 198 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 RAB6BQ9NRW1 208 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 ETNK2Q9NVF9 386 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 TJP2Q9UDY2 1190 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 PHTF1Q9UMS5 762 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 ANK1P16157 1881 aa8.62□□□□□ -1.03
SPG11-209ENST00000558253 TCRBV9S1A1TA0A576 114 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 C17orf102A2RUQ5 167 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 MANSC4A6NHS7 340 aaPredicted RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 KBTBD13C9JR72 458 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 CSDE1O75534 798 aaKnown RBP8.61□□□□□ -1.03
SPG11-209ENST00000558253 DAB1O75553 588 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 TMEM63AO94886 807 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 CREB1P16220 341 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.031e-6■□□□□ 10.7
SPG11-209ENST00000558253 CYP2F1P24903 491 aa8.61□□□□□ -1.03
SPG11-209ENST00000558253 SSTR1P30872 391 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms