RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 FEZ2Q9UHY8 353 aaPredicted RBP6.94□□□□□ -1.3
RTF1-204ENST00000558117 KBTBD13C9JR72 458 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 E9PLN8 166 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 H3BML4 177 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CTNND1O60716 968 aaKnown RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 RHOBTB3O94955 611 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 ZFPL1O95159 310 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 FTH1P19P0C7X4 201 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 ITGAMP11215 1152 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CSF2RAP15509 400 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 AVPR2P30518 371 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 PIK3CGP48736 1102 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 PSMC1P62191 440 aaKnown RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 MINDY4Q4G0A6 757 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 ABHD17BQ5VST6 288 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 MCM10Q7L590 875 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 OVCH2Q7RTZ1 564 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CELF5Q8N6W0 485 aaKnown RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 Q8NA96 180 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 NSUN7Q8NE18 718 aaKnown RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 TRPV1Q8NER1 839 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 NACC2Q96BF6 587 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 SLC35A4Q96G79 324 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CDK5RAP3Q96JB5 506 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 VKORC1Q9BQB6 163 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 IKZF4Q9H2S9 585 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 BRD9Q9H8M2 597 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 CDYLQ9Y232 598 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 SMG1Q96Q15 3661 aaKnown RBP6.93□□□□□ -1.3
RTF1-204ENST00000558117 UTYO14607 1347 aa6.93□□□□□ -1.3
RTF1-204ENST00000558117 PQBP1O60828 265 aaKnown RBP6.92□□□□□ -1.3
RTF1-204ENST00000558117 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
RTF1-204ENST00000558117 MATN4O95460 622 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 ANXA1P04083 346 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 HKR1P10072 659 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 HTR1BP28222 390 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 CACNB3P54284 484 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 TREML2Q5T2D2 321 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 HECTD2Q5U5R9 776 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 ANKRD18AQ8IVF6 992 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 ADHFE1Q8IWW8 467 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 COLGALT2Q8IYK4 626 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 PDPRQ8NCN5 879 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 NEK9Q8TD19 979 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 FAM167AQ96KS9 214 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 ISCA1Q9BUE6 129 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 TBCCD1Q9NVR7 557 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
RTF1-204ENST00000558117 FLRT1Q9NZU1 646 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 MORF4L1Q9UBU8 362 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 TBX21Q9UL17 535 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 AGAP1Q9UPQ3 857 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 AGTPBP1Q9UPW5 1226 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 AFG3L2Q9Y4W6 797 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 ZHX2Q9Y6X8 837 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 CEP295Q9C0D2 2601 aa6.92□□□□□ -1.3
RTF1-204ENST00000558117 FRYQ5TBA9 3013 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 PIPSLA2A3N6 862 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 KRT4P19013 534 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 HDCP19113 662 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 RGS2P41220 211 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 EIF4A1P60842 406 aaKnown RBP6.91□□□□□ -1.3
RTF1-204ENST00000558117 PURAQ00577 322 aaKnown RBP6.91□□□□□ -1.3
RTF1-204ENST00000558117 ZNF844Q08AG5 666 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 TAF7Q15545 349 aaPredicted RBP6.91□□□□□ -1.3
RTF1-204ENST00000558117 Q6YL49 198 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 Q6ZPA2 131 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 ANKRD33Q7Z3H0 272 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 WDR75Q8IWA0 830 aaKnown RBP6.91□□□□□ -1.3
RTF1-204ENST00000558117 BEND2Q8NDZ0 799 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 ASB10Q8WXI3 467 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 BOD1Q96IK1 185 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 LRIG1Q96JA1 1093 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 NT5C1BQ96P26 610 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 SLITRK6Q9H5Y7 841 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 PACSIN3Q9UKS6 424 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 PCDHA6Q9UN73 950 aa6.91□□□□□ -1.3
RTF1-204ENST00000558117 GBF1Q92538 1859 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 A0A088AWK7 358 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 TUSC2O75896 110 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CA3P07451 260 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 FDXRP22570 491 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 RAB1AP62820 205 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 EXOSC9Q06265 439 aaKnown RBP6.9□□□□□ -1.3
RTF1-204ENST00000558117 DCTN1Q14203 1278 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CYP2A13Q16696 494 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CCDC152Q4G0S7 254 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 ARHGAP29Q52LW3 1261 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CRB2Q5IJ48 1285 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 MFSD14CQ5VZR4 134 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 MORC1Q86VD1 984 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 PDSS2Q86YH6 399 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 KIAA2013Q8IYS2 634 aa6.9□□□□□ -1.3
RTF1-204ENST00000558117 CFAP52Q8N1V2 620 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms