RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CLUL1Q15846 466 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 BRMS1LQ5PSV4 323 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 FAM131BQ86XD5 332 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 TMC8Q8IU68 726 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 PSTKQ8IV42 348 aaKnown RBP17.55■□□□□ 0.4
SNX1-203ENST00000558040 RCOR2Q8IZ40 523 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 EXD1Q8NHP7 514 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 MRPS31Q92665 395 aaKnown RBP17.55■□□□□ 0.4
SNX1-203ENST00000558040 RNF34Q969K3 372 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 NTAN1Q96AB6 310 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 PEBP4Q96S96 227 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 ADAM33Q9BZ11 813 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 PRKD2Q9BZL6 878 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 SFXN1Q9H9B4 322 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 IL21Q9HBE4 155 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 MARCH2Q9P0N8 246 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 RASAL2Q9UJF2 1139 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 DNMT3LQ9UJW3 386 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 TLR6Q9Y2C9 796 aa17.55■□□□□ 0.4
SNX1-203ENST00000558040 CEP104O60308 925 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 SRGAP2O75044 1071 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 TADA3O75528 432 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 ZRANB2O95218 330 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNX1-203ENST00000558040 RARAP10276 462 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 MYL4P12829 197 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 CXCR3P49682 368 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 ATXN1P54253 815 aaKnown RBP17.54■□□□□ 0.4
SNX1-203ENST00000558040 EPHA5P54756 1037 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 COPS2P61201 443 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 EFEMP1Q12805 493 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 WHAMMP3Q1A5X7 153 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 SMTNL2Q2TAL5 461 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 ERMARDQ5T6L9 678 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 CCDC181Q5TID7 509 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 PRPF38BQ5VTL8 546 aaKnown RBP17.54■□□□□ 0.4
SNX1-203ENST00000558040 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
SNX1-203ENST00000558040 CCDC50Q8IVM0 306 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 HSPH1Q92598 858 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 SNRNP25Q9BV90 132 aaKnown RBP17.54■□□□□ 0.4
SNX1-203ENST00000558040 LRRC3Q9BY71 257 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 WDCPQ9H6R7 721 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 CCSER2Q9H7U1 834 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 WDR6Q9NNW5 1121 aaKnown RBP17.54■□□□□ 0.4
SNX1-203ENST00000558040 CALCOCO1Q9P1Z2 691 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 SFMBT1Q9UHJ3 866 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 NUDT5Q9UKK9 219 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 MRFAP1Q9Y605 127 aa17.54■□□□□ 0.4
SNX1-203ENST00000558040 CCDC195A0A1B0GUA6 201 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 LRRD1A4D1F6 860 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PFKLP17858 780 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 CCR1P32246 355 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PAFAH1B1P43034 410 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 TBX4P57082 545 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 CKAP4Q07065 602 aaKnown RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 MTA1Q13330 715 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 EIF4EBP2Q13542 120 aaPredicted RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 KCNC3Q14003 757 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PPP2R5DQ14738 602 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PDK2Q15119 407 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 TRIP4Q15650 581 aaPredicted RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 TCEAL5Q5H9L2 206 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 EFHC2Q5JST6 749 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 KCNT1Q5JUK3 1230 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 DCAF12L1Q5VU92 463 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 TXNRD3NBQ6F5E7 133 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 TMEM184AQ6ZMB5 413 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 CYP4V2Q6ZWL3 525 aaPredicted RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 MAP7D3Q8IWC1 876 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 HS6ST3Q8IZP7 471 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 KCTD6Q8NC69 237 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 CMASQ8NFW8 434 aaPredicted RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 COG1Q8WTW3 980 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 ATXN3LQ9H3M9 355 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PRDM12Q9H4Q4 367 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 IGFLR1Q9H665 355 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 PIDD1Q9HB75 910 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNX1-203ENST00000558040 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNX1-203ENST00000558040 FZD10Q9ULW2 581 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 AP4E1Q9UPM8 1137 aa17.53■□□□□ 0.4
SNX1-203ENST00000558040 HBS1LQ9Y450 684 aaKnown RBP17.53■□□□□ 0.4
SNX1-203ENST00000558040 SLC12A8A0AV02 714 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 ZNF197O14709 1029 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 MSI1O43347 362 aaKnown RBP17.52■□□□□ 0.4
SNX1-203ENST00000558040 COCHO43405 550 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 PAPLNO95428 1278 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 OAS1P00973 400 aaKnown RBP17.52■□□□□ 0.4
SNX1-203ENST00000558040 APOEP02649 317 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 RHOP08100 348 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 PYGMP11217 842 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 DDX6P26196 483 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNX1-203ENST00000558040 SCAPQ12770 1279 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 HYAL1Q12794 435 aa17.52■□□□□ 0.4
SNX1-203ENST00000558040 ZNF211Q13398 564 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms