RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SERPING1P05155 500 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 GLI1P08151 1106 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 CORO1AP31146 461 aaKnown RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 ADKP55263 362 aaKnown RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 PTP4A2Q12974 167 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 HTR3DQ70Z44 454 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 ZDHHC17Q8IUH5 632 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 CPA6Q8N4T0 437 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 NUP210Q8TEM1 1887 aaPredicted RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 ATP2A3Q93084 1043 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.96□□□□□ -0.01
USP3-205ENST00000557884 FOXQ1Q9C009 403 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 ECT2Q9H8V3 914 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 TBC1D17Q9HA65 648 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 METTL5Q9NRN9 209 aaKnown RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 COX16Q9P0S2 106 aa14.96□□□□□ -0.01
USP3-205ENST00000557884 HBS1LQ9Y450 684 aaKnown RBP14.96□□□□□ -0.01
USP3-205ENST00000557884 ANAPC1Q9H1A4 1944 aa14.96□□□□□ -0.02
USP3-205ENST00000557884 NFATC1O95644 943 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 CYP17A1P05093 508 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 TBX4P57082 545 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 CDK17Q00537 523 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 TBX2Q13207 712 aaPredicted RBP14.95□□□□□ -0.02
USP3-205ENST00000557884 TRIP4Q15650 581 aaPredicted RBP14.95□□□□□ -0.02
USP3-205ENST00000557884 ACAD10Q6JQN1 1059 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 MON1BQ7L1V2 547 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 BEND5Q7L4P6 421 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 DENND1CQ8IV53 801 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 OR8K1Q8NGG5 319 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 PBXIP1Q96AQ6 731 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 PLD4Q96BZ4 506 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 MRFAP1L1Q96HT8 127 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
USP3-205ENST00000557884 BZW2Q9Y6E2 419 aaKnown RBP14.95□□□□□ -0.02
USP3-205ENST00000557884 DENND4CQ5VZ89 1909 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 COL4A3Q01955 1670 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 AKR1B15C9JRZ8 316 aaPredicted RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 SPECC1L-ADORA2AF8WAN1 911 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 TRUB2O95900 331 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 CALB1P05937 261 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 CTHP32929 405 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 SCNN1AP37088 669 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 HARS2P49590 506 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 VCPP55072 806 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 PRKCQQ04759 706 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 DHCR24Q15392 516 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 TMEM31Q5JXX7 168 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 LY6G5CQ5SRR4 150 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 NAIF1Q69YI7 327 aaPredicted RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 TXNDC11Q6PKC3 985 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 Q6ZNB5 142 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 MCOLN2Q8IZK6 566 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 ADGRG2Q8IZP9 1017 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 EMC1Q8N766 993 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 KIAA1958Q8N8K9 716 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 SHDQ96IW2 340 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 SERPINB11Q96P15 392 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 DNAJC7Q99615 494 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 DCLK3Q9C098 648 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 C8orf33Q9H7E9 229 aaPredicted RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 ABHD10Q9NUJ1 306 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 ZNHIT6Q9NWK9 470 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 DDIT4Q9NX09 232 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP3-205ENST00000557884 ADAMTS1Q9UHI8 967 aa14.94□□□□□ -0.02
USP3-205ENST00000557884 AGO1Q9UL18 857 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 NDRG2Q9UN36 371 aaKnown RBP14.94□□□□□ -0.02
USP3-205ENST00000557884 TECTAO75443 2155 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 SHISA7A6NL88 538 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 TRDMT1O14717 391 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 IRAK2O43187 625 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 ATMINO43313 823 aaPredicted RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 MOCS2O96007 188 aaPredicted RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 FTLP02792 175 aaPredicted RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 TFE3P19532 575 aaPredicted RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 HNRNPH3P31942 346 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 GJA4P35212 333 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 NOS2P35228 1153 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 FLT3P36888 993 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 EIF4A3P38919 411 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 MATKP42679 507 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 SULT1E1P49888 294 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 STARD6P59095 220 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 NR1H3Q13133 447 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 NME3Q13232 169 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 UBXN2BQ14CS0 331 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 TSR1Q2NL82 804 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 ZC3H12AQ5D1E8 599 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 CWF19L1Q69YN2 538 aaKnown RBP14.93□□□□□ -0.02
USP3-205ENST00000557884 DNAJC24Q6P3W2 148 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 RHBDF2Q6PJF5 856 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 WDR59Q6PJI9 974 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 ZNF852Q6ZMS4 543 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
USP3-205ENST00000557884 TMEM25Q86YD3 366 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms