RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RAD54BQ9Y620 910 aa16.78■□□□□ 0.28
SCFD1-224ENST00000557713 ASPMQ8IZT6 3477 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 CEP192Q8TEP8 1941 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 FAM237AA0A1B0GTK4 181 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 A0A1W2PQD8 194 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 ARHGAP33O14559 1287 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 PENKP01210 267 aaPredicted RBP16.77■□□□□ 0.28
SCFD1-224ENST00000557713 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 CD58P19256 250 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.28
SCFD1-224ENST00000557713 CD93Q9NPY3 652 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 ZNF510Q9Y2H8 683 aa16.77■□□□□ 0.28
SCFD1-224ENST00000557713 PCDH15Q96QU1 1955 aa16.77■□□□□ 0.27
SCFD1-224ENST00000557713 ASCC3Q8N3C0 2202 aaKnown RBP16.76■□□□□ 0.27
SCFD1-224ENST00000557713 SPAARA0A1B0GVQ0 90 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 RALAP11233 206 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 KRT13P13646 458 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 PSMC2P35998 433 aaKnown RBP16.76■□□□□ 0.27
SCFD1-224ENST00000557713 ATXN3P54252 364 aaPredicted RBP16.76■□□□□ 0.27
SCFD1-224ENST00000557713 COG7P83436 770 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 DPYDQ12882 1025 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 ADAM9Q13443 819 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 FYB2Q5VWT5 728 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 TADA2BQ86TJ2 420 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 METTL3Q86U44 580 aaKnown RBP16.76■□□□□ 0.27
SCFD1-224ENST00000557713 HDDC3Q8N4P3 179 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 MINDY1Q8N5J2 469 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 BHMTQ93088 406 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 HSPA12BQ96MM6 686 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 UBXN6Q9BZV1 441 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 TMEM8AQ9HCN3 771 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 STON1Q9Y6Q2 735 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 MYH10P35580 1976 aa16.76■□□□□ 0.27
SCFD1-224ENST00000557713 ADAMTS9Q9P2N4 1935 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 TMEM8BA6NDV4 472 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 HYAL3O43820 417 aaPredicted RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 OPHN1O60890 802 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 CD59P13987 128 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 GTF2H1P32780 548 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 CHKAP35790 457 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 SYKP43405 635 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 NDUFA8P51970 172 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 MFAP3P55082 362 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 SIM1P81133 766 aaPredicted RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 ENPP2Q13822 863 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 ZNF394Q53GI3 561 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 GUF1Q8N442 669 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 OR2I1PQ8NGU4 316 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 SEMA4DQ92854 862 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 CCDC47Q96A33 483 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 FAXDC2Q96IV6 333 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 HEXIM2Q96MH2 286 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 CDK5RAP1Q96SZ6 601 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 DCLK3Q9C098 648 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 DNAAF2Q9NVR5 837 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 THAP10Q9P2Z0 257 aaPredicted RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 RALYQ9UKM9 306 aaKnown RBP16.75■□□□□ 0.27
SCFD1-224ENST00000557713 NEUROG3Q9Y4Z2 214 aa16.75■□□□□ 0.27
SCFD1-224ENST00000557713 AKAP13Q12802 2813 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 NDUFS2O75306 463 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 GJB3O75712 270 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 SYPP08247 313 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 PI4KAP42356 2102 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 ZNF132P52740 706 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 FAM193AP78312 1265 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 EFEMP1Q12805 493 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 GEN1Q17RS7 908 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 FUT11Q495W5 492 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 ZCWPW2Q504Y3 356 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 RAB41Q5JT25 222 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 KRT39Q6A163 491 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 CCDC150Q8NCX0 1101 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 FOXJ1Q92949 421 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 TMEM176AQ96HP8 235 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 PIWIL1Q96J94 861 aaKnown RBP16.74■□□□□ 0.27
SCFD1-224ENST00000557713 FAM124BQ9H5Z6 455 aaPredicted RBP16.74■□□□□ 0.27
SCFD1-224ENST00000557713 ITM2CQ9NQX7 267 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 RASAL2Q9UJF2 1139 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 AGO1Q9UL18 857 aaKnown RBP16.74■□□□□ 0.27
SCFD1-224ENST00000557713 ZDHHC9Q9Y397 364 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 MSRB2Q9Y3D2 182 aa16.74■□□□□ 0.27
SCFD1-224ENST00000557713 FAM221BA6H8Z2 402 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 NPC1O15118 1278 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 HMBSP08397 361 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 CD6P30203 668 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 CORO1AP31146 461 aaKnown RBP16.73■□□□□ 0.27
SCFD1-224ENST00000557713 IL12RB1P42701 662 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 RAD23BP54727 409 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 SLC14A1Q13336 389 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 SYCP2LQ5T4T6 812 aa16.73■□□□□ 0.27
SCFD1-224ENST00000557713 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms