RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 REXO2Q9Y3B8 237 aaKnown RBP4.91□□□□□ -1.62
PNN-206ENST00000557680 USP15Q9Y4E8 981 aaPredicted RBP4.91□□□□□ -1.62
PNN-206ENST00000557680 LOC105369274A0A096LPK9 316 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 LOC102723532A0A0G2JNH3 316 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 SLC38A8A6NNN8 435 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 F5H0A9 414 aaPredicted RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 CYP27B1O15528 508 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 AHCYL1O43865 530 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 HEXIM1O94992 359 aaKnown RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 CPA1P15085 419 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 KCNA2P16389 499 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 GATA3P23771 443 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 CD6P30203 668 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 APOBEC3AP31941 199 aaPredicted RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 RAD52P43351 418 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 RNASE9P60153 205 aaKnown RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 NANOS3P60323 173 aaKnown RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 NUCB1Q02818 461 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.63
PNN-206ENST00000557680 SF3A3Q12874 501 aaKnown RBP eCLIP4.9□□□□□ -1.631e-6■□□□□ 8.6
PNN-206ENST00000557680 CRHR2Q13324 411 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 ACOX1Q15067 660 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 PDCD4Q53EL6 469 aaKnown RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 RBM20Q5T481 1227 aaKnown RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 DEPDC1Q5TB30 811 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 B3GNTL1Q67FW5 361 aaPredicted RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 MFSD5Q6N075 450 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 TRABD2AQ86V40 505 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 OR4N4Q8N0Y3 316 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 FAM109AQ8N4B1 249 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 HMGB4Q8WW32 186 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 KTI12Q96EK9 354 aaPredicted RBP4.9□□□□□ -1.63
PNN-206ENST00000557680 NUDT22Q9BRQ3 303 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 GHITMQ9H3K2 345 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 ANKEF1Q9NU02 776 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 PARPBPQ9NWS1 579 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 ZDHHC7Q9NXF8 308 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 GPR34Q9UPC5 381 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 USP22Q9UPT9 525 aa4.9□□□□□ -1.63
PNN-206ENST00000557680 RECQL4O94761 1208 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 IPO13O94829 963 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 TFRCP02786 760 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 GGT5P36269 586 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 RGS2P41220 211 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 POLD2P49005 469 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 NDUFV1P49821 464 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ANXA11P50995 505 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 HNRNPMP52272 730 aaKnown RBP eCLIP4.89□□□□□ -1.63
PNN-206ENST00000557680 TDGQ13569 410 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 DYRK1AQ13627 763 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 CCNIQ14094 377 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 DCTN1Q14203 1278 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 METTL24Q5JXM2 366 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 WDR45BQ5MNZ6 344 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 UBAP2Q5T6F2 1119 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 ARMC3Q5W041 872 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 SLC9A4Q6AI14 798 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 DGAT2L7PQ6IED9 249 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 GRHL2Q6ISB3 625 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 SYNE3Q6ZMZ3 975 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 R3HCC1LQ7Z5L2 792 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 MRGPRGQ86SM5 289 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ZNF575Q86XF7 245 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 TMPRSS6Q8IU80 811 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 DNAJC10Q8IXB1 793 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 SLC15A3Q8IY34 581 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ADGRG5Q8IZF4 528 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ABRAQ8N0Z2 381 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 WDR60Q8WVS4 1066 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 CPT1BQ92523 772 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 PRR11Q96HE9 360 aaPredicted RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 TTPALQ9BTX7 342 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 AMBRA1Q9C0C7 1298 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 UNKLQ9H9P5 680 aaKnown RBP4.89□□□□□ -1.63
PNN-206ENST00000557680 NOD2Q9HC29 1040 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 SLC2A4RGQ9NR83 387 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 NDUFAF4Q9P032 175 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 ZBTB1Q9Y2K1 713 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 PIAS3Q9Y6X2 628 aa4.89□□□□□ -1.63
PNN-206ENST00000557680 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 ANKRD18BA2A2Z9 1011 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 PI4KAP2A4QPH2 592 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 H3BNC9 293 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 TOR1BO14657 336 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 PPM1DO15297 605 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 CTIFO43310 598 aaKnown RBP4.88□□□□□ -1.63
PNN-206ENST00000557680 PTP4A3O75365 173 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 TIPRLO75663 272 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 ALADP13716 330 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 ITGALP20701 1170 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 MGAT1P26572 445 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 RBL1P28749 1068 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 PPIFP30405 207 aaKnown RBP4.88□□□□□ -1.63
PNN-206ENST00000557680 CDK7P50613 346 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 CCR9P51686 369 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
PNN-206ENST00000557680 TIRAPP58753 221 aa4.88□□□□□ -1.63
PNN-206ENST00000557680 RRP1BQ14684 758 aaKnown RBP4.88□□□□□ -1.63
PNN-206ENST00000557680 BAK1Q16611 211 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms