RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TRMT10BQ6PF06 316 aaKnown RBP12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 CYP4V2Q6ZWL3 525 aaPredicted RBP12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 SIGLEC10Q96LC7 697 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 BCO2Q9BYV7 579 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 TBC1D30Q9Y2I9 924 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 B4GALT4O60513 344 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 HMGCRP04035 888 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 PIM1P11309 404 aaPredicted RBP12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 SLC1A6P48664 564 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 EPHB1P54762 984 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 TEDDM1Q5T9Z0 273 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 MAP3K21Q5TCX8 1036 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 ARHGAP22Q7Z5H3 698 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 ZBTB8OSQ8IWT0 167 aa12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 SCAF8Q9UPN6 1271 aaKnown RBP12.22□□□□□ -0.45
VIPAS39-211ENST00000557658 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 WNT10BO00744 389 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 MAFO75444 373 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 LYPLA1O75608 230 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 MYL4P12829 197 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 TPSB2P20231 275 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 L1CAMP32004 1257 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 MAGEA3P43357 314 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 RPL26P61254 145 aaKnown RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 CCNIQ14094 377 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 TPSAB1Q15661 275 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 STXBP2Q15833 593 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 CDO1Q16878 200 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 LRRC36Q1X8D7 754 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 C15orf59Q2T9L4 293 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 BOLA3Q53S33 107 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 RALGPS1Q5JS13 557 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 LPCAT4Q643R3 524 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 DPY19L2Q6NUT2 758 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 PGM2L1Q6PCE3 622 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 CDKL3Q8IVW4 592 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 PQLC3Q8N755 202 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 POU5F2Q8N7G0 328 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 AGBL3Q8NEM8 1001 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 PIP4K2CQ8TBX8 421 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 ACMSDQ8TDX5 336 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 ACTRT2Q8TDY3 377 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 PPP4R1Q8TF05 950 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 GDPD5Q8WTR4 605 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 ZNF778Q96MU6 729 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 HAPLN3Q96S86 360 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 GCOM2Q9BZD3 368 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 ACAD9Q9H845 621 aa12.21□□□□□ -0.45
VIPAS39-211ENST00000557658 ANK1P16157 1881 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 EP400Q96L91 3159 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ITM2AO43736 263 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 SIN3BO75182 1162 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 GLRA3O75311 464 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 SRGAP2CP0DJJ0 459 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 FGF3P11487 239 aaPredicted RBP12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ICAM3P32942 547 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 GPD2P43304 727 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 RAB6CQ53S08 254 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 OR6B2Q6IFH4 312 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 SCYL2Q6P3W7 929 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 DENND5BQ6ZUT9 1274 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ATP2A3Q93084 1043 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 CMTM5Q96DZ9 223 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ZBED3Q96IU2 234 aaPredicted RBP12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 TWNKQ96RR1 684 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 NDNQ99608 321 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 EPAS1Q99814 870 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 MIS12Q9H081 205 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 NRDE2Q9H7Z3 1164 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 DNAJC28Q9NX36 388 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 CDH22Q9UJ99 828 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ADAMTS6Q9UKP5 1117 aa12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.46
VIPAS39-211ENST00000557658 A0A1B0GVG6 124 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 PROCP04070 461 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 SERPINE1P05121 402 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 VCLP18206 1134 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 IL4RP24394 825 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 OSTNP61366 133 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 BTKQ06187 659 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 MSLNQ13421 630 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 GRM2Q14416 872 aa12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 N4BP2L1Q5TBK1 243 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-211ENST00000557658 IER5Q5VY09 327 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms