RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PTDSS1P48651 473 aaKnown RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 KPNB1Q14974 876 aaKnown RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 PKDCCQ504Y2 493 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 TAPT1Q6NXT6 567 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 MTHFD1LQ6UB35 978 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 MAMDC4Q6UXC1 1216 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 C4orf50Q6ZRC1 276 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 TREML1Q86YW5 311 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 NDUFAF2Q8N183 169 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 OXNAD1Q96HP4 312 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 NSL1Q96IY1 281 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 SIGLEC10Q96LC7 697 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 NFKBIZQ9BYH8 718 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 TAS2R1Q9NYW7 299 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 PLLPQ9Y342 182 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 SMAPO00193 183 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 GYG2O15488 501 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 KRT36O76013 467 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 AKAP5P24588 427 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 OLIG2Q13516 323 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 PDK2Q15119 407 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 ZNF484Q5JVG2 852 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 SESTD1Q86VW0 696 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 ERO1BQ86YB8 467 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 ZNF398Q8TD17 642 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 DTX3LQ8TDB6 740 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 OPTNQ96CV9 577 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 KCTD15Q96SI1 283 aaPredicted RBP18.35■□□□□ 0.53
XRCC3-218ENST00000557439 LGMNQ99538 433 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 BTBD10Q9BSF8 475 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 SAR1AQ9NR31 198 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 MTMR10Q9NXD2 777 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 LNPEPQ9UIQ6 1025 aa18.35■□□□□ 0.53
XRCC3-218ENST00000557439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.34■□□□□ 0.53
XRCC3-218ENST00000557439 KRT37O76014 449 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 TSHRP16473 764 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 GOT1P17174 413 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 TGM2P21980 687 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 IREB2P48200 963 aaKnown RBP18.34■□□□□ 0.53
XRCC3-218ENST00000557439 RABGGTBP53611 331 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 TP53INP2Q8IXH6 220 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 C16orf70Q9BSU1 422 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 SLC4A5Q9BY07 1137 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 ARHGEF4Q9NR80 690 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 KLK14Q9P0G3 267 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 HESX1Q9UBX0 185 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 BCLAF3A2AJT9 711 aaKnown RBP18.34■□□□□ 0.53
XRCC3-218ENST00000557439 ENO1P06733 434 aaKnown RBP18.34■□□□□ 0.53
XRCC3-218ENST00000557439 VAV1P15498 845 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 RCN2Q14257 317 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 ACSBG2Q5FVE4 666 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 MARCH8Q5T0T0 291 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 CASC4Q6P4E1 433 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 FAM131BQ86XD5 332 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 VPS52Q8N1B4 723 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 MAB21L3Q8N8X9 362 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 RTP4Q96DX8 246 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 NAF1Q96HR8 494 aaKnown RBP18.34■□□□□ 0.53
XRCC3-218ENST00000557439 TLE6Q9H808 572 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 GOLGA2P5Q9HBQ8 144 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 PNPLA8Q9NP80 782 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 AP4E1Q9UPM8 1137 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 C2CD2Q9Y426 696 aa18.34■□□□□ 0.53
XRCC3-218ENST00000557439 WDR27A2RRH5 827 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 A8MXQ7 604 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 CCDC22O60826 627 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 ESRRAP11474 423 aaPredicted RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 PRKCHP24723 683 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 TMEM110Q86TL2 294 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 SETD4Q9NVD3 440 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 MTO1Q9Y2Z2 717 aaKnown RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 H3BRB1 525 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 PDHA1P08559 390 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 CES3Q6UWW8 571 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 SHKBP1Q8TBC3 707 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 E2F7Q96AV8 911 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 CLPTM1LQ96KA5 538 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 TBCBQ99426 244 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 EBF4Q9BQW3 602 aa18.33■□□□□ 0.52
XRCC3-218ENST00000557439 NXF3Q9H4D5 531 aaKnown RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 TUT1Q9H6E5 874 aaKnown RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 PPARGC1AQ9UBK2 798 aaKnown RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.33■□□□□ 0.52
XRCC3-218ENST00000557439 DPYSL4O14531 572 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 LYPLA1O75608 230 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-218ENST00000557439 NUDCD3Q8IVD9 361 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 DEPDC1BQ8WUY9 529 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 CSPG4P5Q96PW8 444 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 DTLQ9NZJ0 730 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 SPDYE5A6NIY4 337 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 A6NJR5 290 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 SPAG6O75602 509 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 HOXA11P31270 313 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-218ENST00000557439 AQP5P55064 265 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 SESN2P58004 480 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-218ENST00000557439 KDSRQ06136 332 aa18.32■□□□□ 0.52
XRCC3-218ENST00000557439 CRYMQ14894 314 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms