RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 NDRG1Q92597 394 aaKnown RBP14.43□□□□□ -0.1
VPS33B-206ENST00000557358 SERPINB11Q96P15 392 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 HINFPQ9BQA5 517 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 ZSWIM1Q9BR11 485 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 STK33Q9BYT3 514 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 LHX5Q9H2C1 402 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 SIX2Q9NPC8 291 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 DNAJC17Q9NVM6 304 aaKnown RBP14.43□□□□□ -0.1
VPS33B-206ENST00000557358 R4GN57 208 aa14.43□□□□□ -0.1
VPS33B-206ENST00000557358 TYW5A2RUC4 315 aaKnown RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 ALDH1A2O94788 518 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 LATS1O95835 1130 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 CALCAP01258 141 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 TYRP14679 529 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 COPB1P53618 953 aaKnown RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 APBA1Q02410 837 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 KDSRQ06136 332 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 PDCLQ13371 301 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SYCP1Q15431 976 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 EFHC1Q5JVL4 640 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SDE2Q6IQ49 451 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 MSANTD2Q6P1R3 559 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 TSSK4Q6SA08 328 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 TOGARAM2Q6ZUX3 1019 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 TMEM110Q86TL2 294 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 TMEM25Q86YD3 366 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 DENND1CQ8IV53 801 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 CCDC117Q8IWD4 279 aaPredicted RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SCUBE3Q8IX30 993 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 MAML2Q8IZL2 1156 aaPredicted RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 CAMKK1Q8N5S9 505 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 NAT16Q8N8M0 369 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 PPP1R13BQ96KQ4 1090 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 BPIFA3Q9BQP9 254 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 MARK1Q9P0L2 795 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SFMBT1Q9UHJ3 866 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 SLC12A6Q9UHW9 1150 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 FHOD1Q9Y613 1164 aa14.42□□□□□ -0.1
VPS33B-206ENST00000557358 PTPRZ1P23471 2315 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 LGALS16A8MUM7 142 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 E5RJQ4 531 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 CACNG3O60359 315 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 TULP3O75386 442 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 CAVIN2O95810 425 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 GLI1P08151 1106 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 CCDC172P0C7W6 258 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 HOXA6P31267 233 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 GBP1P32455 592 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 DGKGP49619 791 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 ZNF165P49910 485 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 SEC13P55735 322 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 KCNMA1Q12791 1236 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 GAS6Q14393 721 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 TRIP4Q15650 581 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 C2orf27AQ580R0 203 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 EOGTQ5NDL2 527 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 LRSAM1Q6UWE0 723 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 Q6ZNB5 142 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 BEND5Q7L4P6 421 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 SYT13Q7L8C5 426 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 SLC47A2Q86VL8 602 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 ZDHHC17Q8IUH5 632 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 PASD1Q8IV76 773 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 CPXM2Q8N436 756 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 ZNF557Q8N988 423 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 DDI1Q8WTU0 396 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 UCMAQ8WVF2 138 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 POPDC2Q9HBU9 364 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 FBRSL1Q9HCM7 1045 aaKnown RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 AGO1Q9UL18 857 aaKnown RBP14.41□□□□□ -0.1
VPS33B-206ENST00000557358 FANCMQ8IYD8 2048 aa14.41□□□□□ -0.1
VPS33B-206ENST00000557358 CCDC163A0A0D9SF12 145 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 HSF2BPO75031 334 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 APBB3O95704 486 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 APOEP02649 317 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 CYP11B1P15538 503 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 CLCN1P35523 988 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 STAT1P42224 750 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 SLC6A11P48066 632 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 RPL34P49207 117 aaKnown RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 TBX4P57082 545 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 YWHAZP63104 245 aaKnown RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 CDK17Q00537 523 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 RING1Q06587 406 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 MTA1Q13330 715 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 NNTQ13423 1086 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 DMC1Q14565 340 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 MPPE1Q53F39 396 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 C10orf76Q5T2E6 689 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
VPS33B-206ENST00000557358 OR6B2Q6IFH4 312 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 CEP68Q76N32 757 aa14.4□□□□□ -0.1
VPS33B-206ENST00000557358 CACNA2D4Q7Z3S7 1137 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms