RNA–Protein interactions for RNA: ENST00000557355.1

LINC01146-208, Transcript of long intergenic non-protein coding RNA 1146, human

TSL 4 BASIC

Gene LINC01146, Length 548 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01146-208	ENST00000557355	ADGRL3	Q9HAR2	1447 aa		4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	LMTK3	Q96Q04	1460 aa		4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	RGPD1	P0DJD0	1748 aa		4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	PEAK1	Q9H792	1746 aa		4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	XIRP1	Q702N8	1843 aa	Known RBP	4.6	□□□□□ -1.67
LINC01146-208	ENST00000557355	OVOS2	A0A0J9YW53	1432 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PSMD9	O00233	223 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	FTL	P02792	175 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	APEH	P13798	732 aa	Known RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	HDC	P19113	662 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	TNFRSF1B	P20333	461 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	GK	P32189	559 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	LMAN2	Q12907	356 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.59	□□□□□ -1.67	6e-7	■□□□□ 10.5
LINC01146-208	ENST00000557355	ZNF750	Q32MQ0	723 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	OVOS2	Q6IE36	1432 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	STRC	Q7RTU9	1775 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	NECAB2	Q7Z6G3	386 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	NOP9	Q86U38	636 aa	Known RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	ZNF280B	Q86YH2	543 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	RFX6	Q8HWS3	928 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	BRIX1	Q8TDN6	353 aa	Known RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	ZNF479	Q96JC4	524 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	FAM84B	Q96KN1	310 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	NLRP4	Q96MN2	994 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	MEIS3	Q99687	375 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PANK3	Q9H999	370 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PNPO	Q9NVS9	261 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	CRYBG1	Q9Y4K1	1723 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	SNX14	Q9Y5W7	946 aa		4.59	□□□□□ -1.67
LINC01146-208	ENST00000557355	PMPCB	O75439	489 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	NGFR	P08138	427 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	CYP2C9	P11712	490 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	HSD3B2	P26439	372 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	CDC25A	P30304	524 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	ABCB5	Q2M3G0	1257 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	C9orf50	Q5SZB4	431 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	CC2D1B	Q5T0F9	858 aa	Known RBP	4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	SYDE2	Q5VT97	1194 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	PTCHD4	Q6ZW05	846 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	SELENON	Q9NZV5	590 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	MCM8	Q9UJA3	840 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	TCF20	Q9UGU0	1960 aa	Known RBP	4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	LTN1	O94822	1766 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	ABCA3	Q99758	1704 aa		4.58	□□□□□ -1.68
LINC01146-208	ENST00000557355	ALS2	Q96Q42	1657 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	CAMTA1	Q9Y6Y1	1673 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	LRRC37A3	O60309	1634 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	USP6	P35125	1406 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	POLR3A	O14802	1390 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	CGNL1	Q0VF96	1302 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	SHTN1	A0MZ66	631 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	IFITM10	A6NMD0	228 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	CPA2	P48052	419 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	DGKE	P52429	567 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	SOX8	P57073	446 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	HSF1	Q00613	529 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	KRT17	Q04695	432 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	STIM1	Q13586	685 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	MLC1	Q15049	377 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	MANEA	Q5SRI9	462 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	DENND2C	Q68D51	928 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	VSTM1	Q6UX27	236 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	DCDC5	Q6ZRR9	648 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	PNMA8A	Q86V59	439 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	MIER2	Q8N344	545 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	LINC01465	Q8N7H1	131 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	IGFBPL1	Q8WX77	278 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	DNASE2B	Q8WZ79	361 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	C17orf80	Q9BSJ5	609 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	KRTAP4-4	Q9BYR3	166 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	TMEM8A	Q9HCN3	771 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	STK26	Q9P289	416 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	LPAR3	Q9UBY5	353 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	TMX2	Q9Y320	296 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	KNSTRN	Q9Y448	316 aa		4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	MED1	Q15648	1581 aa	Predicted RBP	4.57	□□□□□ -1.68
LINC01146-208	ENST00000557355	NFAT5	O94916	1531 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	PRSS47	A8MTI9	375 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355		M0R3H8	397 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	DTNB	O60941	627 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	FGF2	P09038	288 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	XRCC6	P12956	609 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	KCNA3	P22001	575 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	PPP2R1A	P30153	589 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	MAP2K6	P52564	334 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	ZIK1	Q3SY52	487 aa	Predicted RBP	4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	MGAT5B	Q3V5L5	792 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	GFI1B	Q5VTD9	330 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	RAB11FIP4	Q86YS3	637 aa		4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	MAFA	Q8NHW3	353 aa	Predicted RBP	4.56	□□□□□ -1.68
LINC01146-208	ENST00000557355	SLC25A28	Q96A46	364 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms