RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ALPLP05186 524 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 YY1P25490 414 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 WDR5P61964 334 aaKnown RBP4.98□□□□□ -1.61
VRK1-207ENST00000557352 MTX1Q13505 466 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 SEMA5AQ13591 1074 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 ACOX1Q15067 660 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 C9orf47Q6ZRZ4 202 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 PIM3Q86V86 326 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 SUN3Q8TAQ9 357 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 STRBPQ96SI9 672 aaKnown RBP4.98□□□□□ -1.61
VRK1-207ENST00000557352 SCNM1Q9BWG6 230 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 BRIP1Q9BX63 1249 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 AGO4Q9HCK5 861 aaKnown RBP4.98□□□□□ -1.61
VRK1-207ENST00000557352 ARL8BQ9NVJ2 186 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 TCEAL9Q9UHQ7 104 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 SQORQ9Y6N5 450 aa4.98□□□□□ -1.61
VRK1-207ENST00000557352 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 C2CD4BA6NLJ0 364 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 TULP3O75386 442 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 TOMM40O96008 361 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 ANXA2P07355 339 aaKnown RBP4.97□□□□□ -1.61
VRK1-207ENST00000557352 CD63P08962 238 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 RPL17P18621 184 aaKnown RBP4.97□□□□□ -1.61
VRK1-207ENST00000557352 RAE1P78406 368 aaKnown RBP4.97□□□□□ -1.61
VRK1-207ENST00000557352 GALEQ14376 348 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 AASDHQ4L235 1098 aaPredicted RBP4.97□□□□□ -1.61
VRK1-207ENST00000557352 CYB5RLQ6IPT4 315 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 COLCA1Q6ZS62 124 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 RNF44Q7L0R7 432 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 TFAP2DQ7Z6R9 452 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 TRMT61AQ96FX7 289 aaKnown RBP4.97□□□□□ -1.61
VRK1-207ENST00000557352 MARK4Q96L34 752 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 BTBD1Q9H0C5 482 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 SLC25A32Q9H2D1 315 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 ZBTB40Q9NUA8 1239 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 PCDHGB6Q9Y5F9 930 aa4.97□□□□□ -1.61
VRK1-207ENST00000557352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.96□□□□□ -1.62
VRK1-207ENST00000557352 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 RHCEP18577 417 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 PBX1P40424 430 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 THBS3P49746 956 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 RHDQ02161 417 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 GFOD2Q3B7J2 385 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 ZNF793Q6ZN11 406 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 MMP21Q8N119 569 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 P2RY11Q96G91 374 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 TMEM45AQ9NWC5 275 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
VRK1-207ENST00000557352 HEMK1Q9Y5R4 338 aaPredicted RBP4.96□□□□□ -1.62
VRK1-207ENST00000557352 TTBK1Q5TCY1 1321 aaPredicted RBP4.96□□□□□ -1.62
VRK1-207ENST00000557352 A0A087WZ62 844 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 B4DGG1 531 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 CBSLP0DN79 551 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 HOXA7P31268 230 aaPredicted RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 ATICP31939 592 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 CBSP35520 551 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 DGKQP52824 942 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 NANOS2P60321 138 aaKnown RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 B4GALNT1Q00973 533 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 KCNJ12Q14500 433 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 MIDNQ504T8 468 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 RRAGBQ5VZM2 374 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 MEPCEQ7L2J0 689 aaKnown RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 BCAS4Q8TDM0 211 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 ADAMTS15Q8TE58 950 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 PIGKQ92643 395 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 UNKQ9C0B0 810 aaKnown RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 FAM234AQ9H0X4 552 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 SEMA4BQ9NPR2 832 aaPredicted RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 HEYLQ9NQ87 328 aaPredicted RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 ABHD10Q9NUJ1 306 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 OBP2AQ9NY56 170 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 VPS4AQ9UN37 437 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 G3BP2Q9UN86 482 aaKnown RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 LRP12Q9Y561 859 aa4.95□□□□□ -1.62
VRK1-207ENST00000557352 SIRT4Q9Y6E7 314 aaPredicted RBP4.95□□□□□ -1.62
VRK1-207ENST00000557352 SLC22A23A1A5C7 686 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 CBFA2T3O75081 653 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 FGF2P09038 288 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 IDUAP35475 653 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 HTR6P50406 440 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 RBM44Q6ZP01 1051 aaKnown RBP4.94□□□□□ -1.62
VRK1-207ENST00000557352 FAM57BQ71RH2 274 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 KRT28Q7Z3Y7 464 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 PHKBQ93100 1093 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 TSR2Q969E8 191 aaKnown RBP4.94□□□□□ -1.62
VRK1-207ENST00000557352 CAMK1GQ96NX5 476 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 APOL5Q9BWW9 433 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 GATA5Q9BWX5 397 aaPredicted RBP4.94□□□□□ -1.62
VRK1-207ENST00000557352 NUP62CLQ9H1M0 184 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 PCDHB2Q9Y5E7 798 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 SNX13Q9Y5W8 968 aa4.94□□□□□ -1.62
VRK1-207ENST00000557352 USP12O75317 370 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms