RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PABPC3Q9H361 631 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ELOVL6Q9H5J4 265 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MAGEB3O15480 346 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 EEF2KMTQ96G04 330 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CCDC3Q9BQI4 270 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PRRC2BQ5JSZ5 2229 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 LOC110117498-PIK3R3F6TDL0 507 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PGRMC2O15173 223 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF806P0C7X5 589 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MAGEA4P43358 317 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 USP11P51784 963 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PIK3R3Q92569 461 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RIT1Q92963 219 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ERMAPQ96PL5 475 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RPL26L1Q9UNX3 145 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 IFRD1O00458 451 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PRG2P13727 222 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 NFYCQ13952 458 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ARID3BQ8IVW6 561 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 THNSL1Q8IYQ7 743 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 A0A0D9SFI3 127 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PRR5LQ6MZQ0 368 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 TDRD5Q8NAT2 981 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 OR6Y1Q8NGX8 325 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 APOL5Q9BWW9 433 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 NDUFB5O43674 189 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CHRNGP07510 517 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CDK7P50613 346 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 OXCT1P55809 520 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 FRG1Q14331 258 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PDK2Q15119 407 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PTPRNQ16849 979 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 DCLK3Q9C098 648 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SLC24A2Q9UI40 661 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 IL2P60568 153 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 XIAPP98170 497 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 VN1R5Q7Z5H4 357 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RAD54LQ92698 747 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 KLHL32Q96NJ5 620 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SDR42E2A6NKP2 422 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 HS6ST1O60243 411 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SRGAP2O75044 1071 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ATP2C1P98194 919 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MEA1Q16626 185 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 REEP1Q9H902 201 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ULK1O75385 1050 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 APBA3O96018 575 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RPL22P35268 128 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SULT1E1P49888 294 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MYBPC3Q14896 1274 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 NSUN6Q8TEA1 469 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 EPB41L4AQ9HCS5 686 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MCM8Q9UJA3 840 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CHL1O00533 1208 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 RBP5P82980 135 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ACAP2Q15057 778 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CRELD2Q6UXH1 353 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 NUDT12Q9BQG2 462 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CST11Q9H112 138 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MED11Q9P086 117 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 WEE2P0C1S8 567 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 IRAK1P51617 712 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CACNA2D1P54289 1103 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 ABATP80404 500 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 BOLA3Q53S33 107 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 DDI2Q5TDH0 399 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MIER2Q8N344 545 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 CCDC115Q96NT0 180 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 NUP50Q9UKX7 468 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 WRBO00258 174 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SEC24AO95486 1093 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 GSTM5P46439 218 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TMEM132BQ14DG7 1078 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TFDP3Q5H9I0 405 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 STRIP1Q5VSL9 837 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TXNDC11Q6PKC3 985 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 SIK2Q9H0K1 926 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 TUBB1Q9H4B7 451 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 MLH3Q9UHC1 1453 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ENO2P09104 434 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 VIL1P09327 827 aaKnown RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 CCNCP24863 283 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 ARFIP1P53367 373 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 INSCQ1MX18 579 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 PDPRQ8NCN5 879 aa9.05□□□□□ -0.96
SYNE3-205ENST00000557275 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 CINPQ9BW66 212 aaPredicted RBP9.05□□□□□ -0.96
SYNE3-205ENST00000557275 IL1RL2Q9HB29 575 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms