RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 LRBAP50851 2863 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 BLACEA4D250 179 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 H0YCG3 227 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 PIGRP01833 764 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 EPHX1P07099 455 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ITGB6P18564 788 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 YWHAQP27348 245 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ST3GAL1Q11201 340 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ENPP2Q13822 863 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 SOWAHAQ2M3V2 549 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ADALQ6DHV7 355 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 SORCS1Q8WY21 1168 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 EXTL1Q92935 676 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 P2RY11Q96G91 374 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 C8orf48Q96LL4 319 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 PSMG3-AS1Q96PY0 264 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 NACA2Q9H009 215 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 TMEM30AQ9NV96 361 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 CDH9Q9ULB4 789 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 RELNP78509 3460 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
PSEN1-220ENST00000557037 K7ENM7 598 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 CDC45O75419 566 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 KRT19P08727 400 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
PSEN1-220ENST00000557037 ZNF132P52740 706 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 WNT7BP56706 349 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 RACK1P63244 317 aaKnown RBP13.24□□□□□ -0.29
PSEN1-220ENST00000557037 E2F1Q01094 437 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 ZNF234Q14588 700 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 TOP6BLQ8N6T0 577 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 C1orf127Q8N9H9 656 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 OR2T3Q8NH03 318 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 PCED1BQ96HM7 432 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 BTBD1Q9H0C5 482 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 GDAP2Q9NXN4 497 aa13.24□□□□□ -0.29
PSEN1-220ENST00000557037 FAM47DPA6NHR8 397 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 NPC1O15118 1278 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 GREM1O60565 184 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 CSO75390 466 aaKnown RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 ACP1P24666 158 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 ARRB1P49407 418 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 MFAP3P55082 362 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 MAPRE1Q15691 268 aaKnown RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 IGFBP7Q16270 282 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 ARL13BQ3SXY8 428 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 BMP2KLQ5H9B9 411 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 SERPINA13PQ6UXR4 307 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 HTR3DQ70Z44 454 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 CSGALNACT2Q8N6G5 542 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 SCAMP5Q8TAC9 235 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 KBTBD7Q8WVZ9 684 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 PLIN2Q99541 437 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 AASDHPPTQ9NRN7 309 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 PDRG1Q9NUG6 133 aa13.23□□□□□ -0.29
PSEN1-220ENST00000557037 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 SETD2Q9BYW2 2564 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-220ENST00000557037 CLEC18AA5D8T8 446 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 WNT9AO14904 365 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 YKT6O15498 198 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 SIGLEC6O43699 453 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 PFKFB2O60825 505 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 TBX18O95935 607 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 PROX2Q3B8N5 592 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 SGO2Q562F6 1265 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 SFMBT2Q5VUG0 894 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CDCP2Q5VXM1 449 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 KRT79Q5XKE5 535 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 KIAA0895LQ68EN5 471 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CLEC18BQ6UXF7 455 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-220ENST00000557037 NUP93Q8N1F7 819 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 ZNF366Q8N895 744 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CLEC18CQ8NCF0 446 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 MYCBPAPQ8TBZ2 947 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 SKA1Q96BD8 255 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CIPCQ9C0C6 399 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
PSEN1-220ENST00000557037 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-220ENST00000557037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSEN1-220ENST00000557037 LARSQ9P2J5 1176 aaKnown RBP13.22□□□□□ -0.29
PSEN1-220ENST00000557037 CLDN5O00501 218 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms