RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 SFMBT1Q9UHJ3 866 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 ATG2BQ96BY7 2078 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 FYNP06241 537 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 CDH5P33151 784 aaPredicted RBP23.88■■□□□ 1.41
TDP1-216ENST00000556867 SOX5P35711 763 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 NOP9Q86U38 636 aaKnown RBP23.88■■□□□ 1.41
TDP1-216ENST00000556867 C12orf40Q86WS4 652 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 ETFBKMTQ8IXQ9 262 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 EZH1Q92800 747 aaPredicted RBP23.88■■□□□ 1.41
TDP1-216ENST00000556867 ATOH1Q92858 354 aaPredicted RBP23.88■■□□□ 1.41
TDP1-216ENST00000556867 FAM149B1Q96BN6 582 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 FANCMQ8IYD8 2048 aa23.88■■□□□ 1.41
TDP1-216ENST00000556867 TEX33O43247 280 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 GFPT2O94808 682 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 SP9P0CG40 484 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 CCR3P51677 355 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 ZNF528Q3MIS6 628 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 LUZP1Q86V48 1076 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 TMEM35BQ8NCS4 154 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 PDCL3Q9H2J4 239 aa23.87■■□□□ 1.41
TDP1-216ENST00000556867 NOCTQ9UK39 431 aaKnown RBP23.87■■□□□ 1.41
TDP1-216ENST00000556867 AGO1Q9UL18 857 aaKnown RBP23.87■■□□□ 1.41
TDP1-216ENST00000556867 A0A1B0GTH6 734 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.86■■□□□ 1.41
TDP1-216ENST00000556867 MSI1O43347 362 aaKnown RBP23.86■■□□□ 1.41
TDP1-216ENST00000556867 LSM8O95777 96 aaKnown RBP23.86■■□□□ 1.41
TDP1-216ENST00000556867 NCAM1P13591 858 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 STAT1P42224 750 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 SNX16P57768 344 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 TPM4P67936 248 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 ANO4Q32M45 955 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 PTPN20Q4JDL3 420 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 FILIP1LQ4L180 1135 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 TAF3Q5VWG9 929 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 ZNF677Q86XU0 584 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 DENND1CQ8IV53 801 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 FAM217AQ8IXS0 508 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 IPO4Q8TEX9 1081 aaKnown RBP23.86■■□□□ 1.41
TDP1-216ENST00000556867 PIWIL1Q96J94 861 aaKnown RBP23.86■■□□□ 1.41
TDP1-216ENST00000556867 PNKPQ96T60 521 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 POPDC2Q9HBU9 364 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 FAM86C1Q9NVL1 165 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 ASNSD1Q9NWL6 643 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 WDR35Q9P2L0 1181 aa23.86■■□□□ 1.41
TDP1-216ENST00000556867 RNF40O75150 1001 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 PAPSS2O95340 614 aaPredicted RBP23.85■■□□□ 1.41
TDP1-216ENST00000556867 IGLV3-27P01718 113 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 ERBB2P04626 1255 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 GLI1P08151 1106 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 CHKAP35790 457 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 SLC6A11P48066 632 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 HARS2P49590 506 aaKnown RBP23.85■■□□□ 1.41
TDP1-216ENST00000556867 RING1Q06587 406 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 PHTF2Q8N3S3 785 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 DQX1Q8TE96 717 aaKnown RBP23.85■■□□□ 1.41
TDP1-216ENST00000556867 BBS2Q9BXC9 721 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 NAALADL1Q9UQQ1 740 aa23.85■■□□□ 1.41
TDP1-216ENST00000556867 CHURC1-FNTBB4DL54 471 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 NEDD8-MDP1E9PL57 170 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 CACNG3O60359 315 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 TULP3O75386 442 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 LATS1O95835 1130 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 MMEP08473 750 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 NBL1P41271 181 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 CXCL12P48061 93 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 YWHAZP63104 245 aaKnown RBP23.84■■□□□ 1.41
TDP1-216ENST00000556867 SATB1Q01826 763 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 CSTF1Q05048 431 aaKnown RBP23.84■■□□□ 1.41
TDP1-216ENST00000556867 NNTQ13423 1086 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 PPP2R5DQ14738 602 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 OLFML1Q6UWY5 402 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 TPGS1Q6ZTW0 290 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 FAM183BPQ6ZVS7 135 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 CPXM2Q8N436 756 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 CCDC26Q8TAB7 109 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 SERPINB11Q96P15 392 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 SYNCQ9H7C4 482 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 ARHGEF4Q9NR80 690 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 STOML2Q9UJZ1 356 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 PIEZO1Q92508 2521 aa23.84■■□□□ 1.41
TDP1-216ENST00000556867 A0A1W2PQC6 194 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 CAPN9O14815 690 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 KAT7O95251 611 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 APODP05090 189 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 TDGF1P13385 188 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 TYRP14679 529 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 GRIA2P42262 883 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 CDR2Q01850 454 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 MESP2Q0VG99 397 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 EFHC1Q5JVL4 640 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 SYPL2Q5VXT5 272 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 NUGGCQ68CJ6 796 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 PKN3Q6P5Z2 889 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 TOGARAM2Q6ZUX3 1019 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 ZDHHC17Q8IUH5 632 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 SLC20A1Q8WUM9 679 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 NELL1Q92832 810 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 NAP1L5Q96NT1 182 aaPredicted RBP23.83■■□□□ 1.41
TDP1-216ENST00000556867 SLC2A13Q96QE2 648 aa23.83■■□□□ 1.41
TDP1-216ENST00000556867 DEC1Q9P2X7 70 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms